Gene Information

Name : phoB (Vch1786_I0227)
Accession : YP_004936391.1
Strain :
Genome accession: NC_016445
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator PhoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 249764 - 250453 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence :
ATGTCTAGAAGGATTCTGGTTGTTGAAGACGAAGCACCGATTCGTGAAATGTTGTGTTTCGTGCTTGAACAAAAGGGCTA
TCAGGCGGTTGAGGCTGAAGATTATGATTCGGCGATGAGTAAGCTGGCTGAGCCTTTTCCTGATCTCGTCCTGCTTGACT
GGATGTTGCCTGGTGGTAGTGGCATCAACCTCATCAAGCATATGAAGCGCGAAGAGATGACGCGCAACATTCCTGTTGTG
ATGCTCACCGCCCGTGGTGAAGAAGAAGATAAAGTTCGCGGCTTAGAAGTGGGCGCGGATGATTACATTACCAAACCGTT
TTCACCTAAAGAGTTGGTTGCCCGTTTAAAAGCGGTGATCCGCCGTGTCACTCCGACGGCGTTGGAGGATGTGATTGATG
TTCAAGGTTTGAAGTTAGATCCGGTCTCACACCGTGTGACCGCTAACGATCAGCCGTTGGATATGGGACCGACTGAGTTC
AAGATGTTACACTTCTTCATGACACACCAAGAGCGTGTGTATAGCCGCGAGCAGCTACTCAATAATGTTTGGGGCACCAA
CGTGTATGTGGAAGATCGCACGGTAGACGTCCACATTCGTCGTCTACGTAAAGCCTTAGAAGACGCTGGACATGATAAGC
TGATCCAGACGGTGCGCGGCGCGGGGTATCGTTTTTCAACCAAAGCCTAA

Protein sequence :
MSRRILVVEDEAPIREMLCFVLEQKGYQAVEAEDYDSAMSKLAEPFPDLVLLDWMLPGGSGINLIKHMKREEMTRNIPVV
MLTARGEEEDKVRGLEVGADDYITKPFSPKELVARLKAVIRRVTPTALEDVIDVQGLKLDPVSHRVTANDQPLDMGPTEF
KMLHFFMTHQERVYSREQLLNNVWGTNVYVEDRTVDVHIRRLRKALEDAGHDKLIQTVRGAGYRFSTKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_004936391.1 DNA-binding response regulator PhoB HE999704.1.gene2815. Protein 1e-40 45
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_002952.2859905.p0 Protein 4e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_002745.1124361.p0 Protein 5e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_009782.5559369.p0 Protein 5e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_002951.3237708.p0 Protein 5e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_007622.3794472.p0 Protein 4e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_002758.1121668.p0 Protein 5e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_009641.5332272.p0 Protein 5e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_013450.8614421.p0 Protein 5e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_007793.3914279.p0 Protein 5e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB NC_003923.1003749.p0 Protein 6e-39 42
phoB YP_004936391.1 DNA-binding response regulator PhoB AE000516.2.gene3505. Protein 1e-33 41