|
Name : Vch1786_I2020 (Vch1786_I2020) Accession : YP_004938158.1 Strain : Genome accession: NC_016445 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 2178716 - 2179690 bp Length : 975 bp Strand : + Note : - DNA sequence : ATGCCCCATTCATTTGATTACCAAACGGTCGCTAAACAAGTGCTAGCAACCGAAATCCATGCATTGCAACAGCTAGAGCA GTATATCAATGACGATTTTGCGCGTGCTTGTGCGATGATTTTGGCCAATCAAACGGGCAAAGTCGTGGTGATGGGGATGG GCAAATCAGGCCATATTGGTAAGAAAATTGCCGCCACCTTAGCCAGTACAGGAACGTCTGCCTTTTTTGTACATCCGGGT GAAGCTTCACATGGGGATCTCGGAATGATTGAACGTGGCGATATCGTACTCGCCATCTCTAATTCCGGAGAATCATCAGA AATCCTCGCCCTGCTTCCCGTGCTCAAGCGCTTGAGTATTCGCGTGATCAGCATGACAGGCAACCCCAACTCCAATATGG CGAAATTGGCCGATATCCATCTGCAAATCACCGTACCGCGTGAAGCTTGCCCGTTAGAGCTTGCGCCAACCTCAAGCACC ACCGCCACTCTCGTAATGGGCGATGCGTTGGCGGTGGCTCTGATGCAGGCACGCGGTTTCACCGCAGAAGATTTTGCTTT GTCTCACCCAGGTGGCGCACTTGGGCGTAAACTCTTGCTCAAACTCAATGACATCATGCACAGTGGTGACGCACTGCCTA AAGTGGCACCACAAGCCTTGATCCGAGATGCTTTGCTCGAAATCAGTCAAAAAGGGCTTGGCATGACAGCCATTGTCGAT GAACAAGACACACTACTCGGTATTTTTACTGACGGTGATTTACGGCGCATTCTTGATAAACGCATCGATATTCACAGCAC TGTGATTGCCGATGTGATGACGCGCCAACCAACCGTTGCTCAGCCCAATTTGCTGGCCGTGGAAGGATTGAATTTAATGC AGGCCAAACGCATTAATGGCCTGATGCTCGTTGAAAATAATAAATTGGTCGGTGCACTGAACATGCACGATCTACTCAAA GCCGGAGTGATGTAA Protein sequence : MPHSFDYQTVAKQVLATEIHALQQLEQYINDDFARACAMILANQTGKVVVMGMGKSGHIGKKIAATLASTGTSAFFVHPG EASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMTGNPNSNMAKLADIHLQITVPREACPLELAPTSST TATLVMGDALAVALMQARGFTAEDFALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVD EQDTLLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLVENNKLVGALNMHDLLK AGVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-43 | 41 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 8e-44 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-43 | 41 |
