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Name : lysS (Vch1786_I0166) Accession : YP_004936335.1 Strain : Genome accession: NC_016445 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 188085 - 189617 bp Length : 1533 bp Strand : + Note : - DNA sequence : ATGACTGATGCTGTTCAAAACGAGATTAATCAAGAGCAAATCGCGCAAGAAGAAAACAAACTGATTGCAGAGCGTCGCAG CAAGTTGGATCACATCCGCAAGAACTGTAAAGCAAACGGGCACCCAAACTCGTTCCGTCGCGACAGCCTAGCGGGTGATC TGCAGAAGAAGTTCGGTGAAAAGAGTAAGGAAGAACTGGAAGCGCTCAATCACGTGGTGTCTATCGCTGGTCGTGTGATG GCAAAACGTGGCCCATTCTTGGTGATTCAAGAAACCTCTGGCCGCATTCAGGCTTATGCATCGAAAGAAGTGCAACAAGA GCTGAAAGATAAATACCAAGGTTTGGATATCGGTGACATCATCGGTGTGCAAGGTGCCCTGCACAAATCCGGTAAAGGCG ATTTGTACGTCAACATGGAGCAATTCCAACTGCTGACCAAAGCACTGCGCCCGCTGCCAGAGAAATTCCACGGTCTGACT GACCAAGAAATGCGTTACCGCCAGCGTTACGTTGACCTGATCGTCAACGAAAACTCTCGCAACGCTTTCATTGTACGTTC TAAGGTGATGTCAGCCATTCGTAACTTCATGATCTCAAAACAGTTCATGGAAGTGGAAACGCCGATGATGCACGTGATCC CTGGTGGTGCTAGTGCGCGCCCATTCATCACGCACCACAACGCGCTCGACATGCCGATGTACCTGCGTATCGCGCCTGAG CTGTACCTGAAGCGTCTGGTTGTCGGTGGTTTTGATCGTGTATTCGAAATCAACCGTAACTTCCGTAACGAAGGTCTTTC TCCACGTCACAACCCAGAATTCACCATGATGGAATTCTATATGGCGTACGCGGACTACAAAGATCTGATGGATCTGACGG AAGAGCTGCTCAGCTCTGTGGCGTTAGAAGTTCTCGGTTCAACCTCCATGCCTTACGGTGAGCATACCGTTGAATTTGGT GGTAAATACGCGCGTATGAGCATGTTTGATGCGATCAAGCACTACAACCCAAATCACGCGCAGATCCAAGCTCTGACCGA AGAAGACATCCAAAACCGTGACCTCATGGTTTCTATCGCGAAATCCGTTCACGTTGATGTGGAGCCTTTCTGGACCTGTG GTCAGCTTCTCGAAGAGATCTTTGGTGAAACGGCTGAGCCGAAACTGATGCAGCCAACTTTCATCACTGGCTACCCAGCA GATATCTCTCCACTGGCACGTCGTAGCGATGACAACCCGTTCTTCACTGACCGCTTTGAGTTCTTCATCGGTGGCCGTGA AGTGGCAAACGGCTTCTCAGAGCTGAACGATGCTGAAGACCAAGATGCGCGTTTCAAAGCCCAAGTGGAAGCGAAAGAGT CTGGTGATGATGAAGCCATGTTCTATGATGCCGACTACATTACCGCTTTAGAGCACGGCTTACCGCCAACAGCGGGTCAA GGTATTGGTATTGATCGTCTGGTTATGCTCCTGACCAATACTCACACTATCCGTGATGTGATTTTGTTCCCAGCGATGCG CCCTCAGCAATAA Protein sequence : MTDAVQNEINQEQIAQEENKLIAERRSKLDHIRKNCKANGHPNSFRRDSLAGDLQKKFGEKSKEELEALNHVVSIAGRVM AKRGPFLVIQETSGRIQAYASKEVQQELKDKYQGLDIGDIIGVQGALHKSGKGDLYVNMEQFQLLTKALRPLPEKFHGLT DQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPE LYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFG GKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPA DISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQ GIGIDRLVMLLTNTHTIRDVILFPAMRPQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-129 | 57 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 6e-77 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004936335.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 8e-130 | 57 |
