Gene Information

Name : nanH (Vch1786_I1277)
Accession : YP_004937432.1
Strain :
Genome accession: NC_016445
Putative virulence/resistance : Virulence
Product : neuraminidase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG4409
EC number : -
Position : 1404710 - 1407055 bp
Length : 2346 bp
Strand : +
Note : -

DNA sequence :
ATGCGTTTCAAAAACGTAAAGAAAACCGCTTTAATGCTTGCAATGTTCGGTATGGCGACAAGCTCAAACGCCGCACTTTT
TGACTATAACGCAACGGGTGACACTGAGTTTGACAGTCCAGCCAAACAGGGATGGATGCAAGACAACACGAATAATGGCA
GCGGCGTTTTAACCAATGCAGATGGAATGCCCGCTTGGTTGGTGCAAGGTATTGGAGGGAGAGCTCAATGGACATATTCT
CTCTCTACTAATCAACATGCCCAAGCATCAAGTTTCGGTTGGCGAATGACGACAGAAATGAAAGTGCTCAGTGGTGGAAT
GATCACAAACTACTACGCCAACGGCACTCAGCGTGTCTTACCCATCATTTCATTAGATAGCAGTGGTAACTTAGTTGTTG
AGTTTGAAGGGCAAACTGGACGCACCGTTTTGGCAACCGGCACAGCAGCAACGGAATATCATAAATTTGAATTGGTATTC
CTTCCTGGAAGTAACCCATCCGCTAGCTTTTACTTCGATGGCAAACTCATTCGTGACAACATCCAGCCGACTGCATCAAA
ACAAAATATGATCGTATGGGGGAATGGCTCATCAAATACGGATGGTGTCGCCGCTTATCGTGATATTAAGTTTGAAATTC
AAGGCGACGTCATCTTCAGAGGCCCAGACCGTATACCGTCCATTGTAGCAAGTAGCGTAACACCAGGGGTGGTAACCGCA
TTTGCAGAGAAACGTGTGGGGGGAGGAGATCCCGGTGCTCTGAGTAATACCAATGACATAATCACTCGTACCTCACGAGA
TGGCGGTATAACTTGGGATACCGAGCTCAACCTCACTGAGCAAATCAATGTCAGTGATGAGTTTGATTTCTCCGATCCTC
GGCCTATCTATGATCCTTCCTCCAATACGGTTCTTGTCTCTTATGCTCGATGGCCGACCGATGCCGCTCAAAACGGAGAT
CGAATAAAACCATGGATGCCAAACGGTATTTTTTACAGCGTCTATGATGTTGCATCAGGGAACTGGCAAGCGCCTATCGA
TGTTACCGATCAGGTGAAAGAACGCAGTTTCCAAATCGCTGGTTGGGGTGGTTCAGAGCTGTATCGCCGAAATACCAGCC
TAAATAGCCAGCAAGACTGGCAATCAAACGCTAAGATCCGAATTGTTGATGGTGCAGCGAACCAGATACAAGTTGCCGAT
GGTAGCCGAAAATATGTTGTCACACTGAGTATTGATGAATCAGGTGGTCTAGTCGCTAATCTAAACGGTGTTAGTGCTCC
GATTATCCTGCAATCTGAACACGCAAAGGTACACTCTTTCCATGACTACGAACTTCAATATTCGGCGTTAAACCACACCA
CAACGTTATTCGTGGATGGTCAGCAAATCACAACTTGGGCTGGCGAAGTATCGCAGGAGAACAACATTCAGTTTGGTAAT
GCGGATGCCCAAATTGACGGCAGACTGCATGTGCAAAAAATTGTTCTCACACAGCAAGGCCATAACCTCGTGGAGTTTGA
TGCTTTCTATTTAGCACAGCAAACCCCTGAAGTAGAGAAAGACCTTGAAAAGCTTGGTTGGACAAAAATTAAAACGGGCA
ACACCATGAGTTTGTATGGAAATGCCAGTGTCAACCCAGGACCGGGTCATGGCATCACCCTTACTCGACAACAAAATATC
AGTGGCAGCCAAAACGGCCGCTTGATCTACCCAGCGATTGTGCTTGATCGTTTCTTCTTGAACGTCATGTCTATTTACAG
TGATGATGGCGGTTCAAACTGGCAAACCGGTTCAACACTCCCTATCCCCTTTCGCTGGAAGAGTTCGAGTATCCTAGAAA
CTCTCGAACCTAGTGAAGCTGATATGGTTGAACTCCAAAACGGTGATCTACTCCTTACTGCACGCCTTGATTTTAACCAA
ATCGTTAATGGTGTGAACTATAGCCCACGCCAGCAATTTTTGAGTAAAGATGGTGGAATCACGTGGAGCCTACTTGAGGC
TAACAACGCTAACGTCTTTAGCAATATCAGTACTGGTACCGTTGATGCTTCTATTACTCGGTTCGAGCAAAGTGACGGTA
GCCATTTCTTACTCTTTACTAACCCACAAGGAAACCCTGCGGGGACAAATGGCAGGCAAAATCTAGGCTTATGGTTTAGC
TTCGATGAAGGGGTGACATGGAAAGGACCAATTCAACTTGTTAATGGTGCATCGGCATATTCTGATATTTATCAATTGGA
TTCGGAAAATGCGATTGTCATTGTTGAAACGGATAATTCAAATATGCGAATTCTTCGTATGCCTATCACATTGCTAAAAC
AGAAGCTGACCTTATCGCAAAACTAA

Protein sequence :
MRFKNVKKTALMLAMFGMATSSNAALFDYNATGDTEFDSPAKQGWMQDNTNNGSGVLTNADGMPAWLVQGIGGRAQWTYS
LSTNQHAQASSFGWRMTTEMKVLSGGMITNYYANGTQRVLPIISLDSSGNLVVEFEGQTGRTVLATGTAATEYHKFELVF
LPGSNPSASFYFDGKLIRDNIQPTASKQNMIVWGNGSSNTDGVAAYRDIKFEIQGDVIFRGPDRIPSIVASSVTPGVVTA
FAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPIYDPSSNTVLVSYARWPTDAAQNGD
RIKPWMPNGIFYSVYDVASGNWQAPIDVTDQVKERSFQIAGWGGSELYRRNTSLNSQQDWQSNAKIRIVDGAANQIQVAD
GSRKYVVTLSIDESGGLVANLNGVSAPIILQSEHAKVHSFHDYELQYSALNHTTTLFVDGQQITTWAGEVSQENNIQFGN
ADAQIDGRLHVQKIVLTQQGHNLVEFDAFYLAQQTPEVEKDLEKLGWTKIKTGNTMSLYGNASVNPGPGHGITLTRQQNI
SGSQNGRLIYPAIVLDRFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQ
IVNGVNYSPRQQFLSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFS
FDEGVTWKGPIQLVNGASAYSDIYQLDSENAIVIVETDNSNMRILRMPITLLKQKLTLSQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1784 NP_231419.1 neuraminidase Not tested VPI-2 Protein 0.0 100
nanH YP_001217324.1 neuraminidase Not tested VPI-2 Protein 0.0 100
nanH AAW31751.2 neuraminidase Not tested VPI-2 Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nanH YP_004937432.1 neuraminidase VFG1117 Protein 0.0 100