Gene Information

Name : Vch1786_I1269 (Vch1786_I1269)
Accession : YP_004937424.1
Strain :
Genome accession: NC_016445
Putative virulence/resistance : Virulence
Product : sialic acid utilization regulator RpiR family
Function : -
COG functional category : K : Transcription
COG ID : COG1737
EC number : -
Position : 1396631 - 1397446 bp
Length : 816 bp
Strand : -
Note : -

DNA sequence : 
ATGGTTCGATTGCGCTCGAATACCGAACCTTTGAGCAAAAAACTCAGAGTTGTTGCTGATTATGTGCTCGAAAATGCACA
TGAAGTTCAGTATCAGACGATCACCGATCTAGCGTTTAATACAAAAACAAGCGAAGCCACTGTAGTCAGGCTATGCCGTG
ATTTGGGCTACAAAGGTTATTCGGATTTTAGAATGGCATTGGCGGTTGATCTTAGTCAGTCTGCAAACCAATCTCAGCCC
AAAATGGATGGCGATATTTGCGAAGTTTCTGCGCAAAGCGCGGTAGATAGTTTAATGGATACTGCAAAACTGATAGACAG
AGCTGCCTTAAATAGAATATGTGAGTTGGTTCATGGGGCTAAGTTTATTGGGTGTGTTGGTGTGGGAGCATCCAGTATCG
TCGGTCGCTATTTGGCGTACCGATTAGTGAGAATAGGTAAAAAAGCCATCATGTATGAAGATACACACTTGGCGGCAATG
AGTGCTGGACAGAGTGTTGTCGGGGATGCATGGTTTGCAATATCGAGCTCAGGTTCTACAAAAGAGGTGGTTCATGCGGC
CACCCAGGCTCATCAACGCGGTGTGCCAGTTGTATCTCTTACGAATATTAGCCATAGCCCACTTTCTTCGATTTCAGATG
AAATGTTAGTGGCTGCAAGGCCTGAAGGCCCTCTCACTGGCGGTGCTTTTTCTTCTAAAGTTGGTGCTTTGTTGCTTGTT
GATGTTTTGATTAACACACTTTTAGATGTATATCCTGAATATTCAGCCTCCGTATTTGGTACTGCGGAAGTGATTTTACC
TTTAATGGATAGTTAA

Protein sequence : 
MVRLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYKGYSDFRMALAVDLSQSANQSQP
KMDGDICEVSAQSAVDSLMDTAKLIDRAALNRICELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAM
SAGQSVVGDAWFAISSSGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGGAFSSKVGALLLV
DVLINTLLDVYPEYSASVFGTAEVILPLMDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1775 NP_231410.1 hypothetical protein Not tested VPI-2 Protein 4e-116 100
VC0395_A1373 YP_001217316.1 hypothetical protein Not tested VPI-2 Protein 4e-116 100
VPI2_0023c ACA01840.1 RpiR family transcriptional regulator Not tested VPI-2 Protein 3e-116 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vch1786_I1269 YP_004937424.1 sialic acid utilization regulator RpiR family VFG1108 Protein 2e-116 100