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Name : Vch1786_I0126 (Vch1786_I0126) Accession : YP_004936295.1 Strain : Genome accession: NC_016445 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 150036 - 151544 bp Length : 1509 bp Strand : - Note : - DNA sequence : GTGTTAGATGTGGCCCTTTTAAGCGTTATAAGACGATGGTATTTCCGTGAAGGATTGTCGAAACGGGAGATTGCCAGACG TACTGGTTTATCCAGAAATACCCTGAAGAAATACTTAAGCCAAGAGCAGGTCGAGCCTGCGTATCCCCAGCGAGCTTGTG TCAGCAAGCTGGATGCATTTGAAACTCTGCTCACAGAAGCGCTTGAGCGAGAGGTGAAAAAGCCACGCAAACAGCGTAAA ACGGTGAAACAGCTGTATCACGAGTTGGTGCCACAAGGCTACACCGGTTCGTACGACAGGGTGGCAGCCTTTGCCCGGTT GTGGCGTCAGCAGCAGACGGTCAGCAAACAAGTGTATGTGCCGCTACAGTTCGCGCCAGGTGAAGCGTTTCAGTTTGACT GGGGCGAGAACTGGGTGTCCATTGGTGGCAAGAAGGTGAAAGTACAAGTCGCGCACTTTAAGCTCTGTCACAGTAAAGTC AGTTACCAACGGGCCTACTGGACGCAAACCCACGAAATGCTGTTTGATGCGCACACGCAGGCCTTCCGGGTGTTTGGTGG AGTTCCTGAGCGCGGTATTTACGACAACATGAAAACGGCTGTCGATAAAATTGGTCGTGGCAAAGAACGGGTGGTGAACA AACGCTTCCAGGCGATGGCCAGTCATTATCTGTTTGAAGCTGATTTCTGTAATCCGGCAGCCGGTTGGGAAAAAGGTCAG GTGGAAAAAGCGGTGCAGGATGGTCGGTATGCACTGTGGCATAAAGCACCTGGATTTAACTCGCTTGAAGCGCTCAATGA CTGGCTGGAACAAGAATGCCAAGCGGTGTGGCAACAACAACAGCACCCGGAGTTTAAACCTCACACGCTCTGGCAGTGCT TGCAGGAAGAGCGTTTGCACCTGATGCACATCAGCAGTGGCTTTGACGGTTTTATCGAACACAGCAAACAGGTCTCCTCG ACCTGCCTCATCACCTTCGAAAACAACAAATACAGCGTGCCTGCAAGCTTTGCTAACCGCAGAGTCAGCCTTCGGGTCTA TCCGGCCGTGCTCCATATCATTGCCGAAGGCAGGAAGGTGACAGAGCATCTGCGTGTGTTTACGCGAGACCACAATGCGC CGGGTCAGGTGCTCTACAACTGGCGGCATTACTTACTGGTGGCACAGCGTAAACCGGGTTCACTGCGAAACGGCGCCCCC TTCCAAACCTTGCCAGAGAGCTTTAAGCAATTGCAGCAGGTGCTGCTGCGTAAAATCGGTGGTGACCGACAGATGGTCGA TGTGCTGGCTCTGGTGCTGCATCATGAAGCTGAACTGGTGGAGCAAGCTATTACGGAAGCACTACAAAGTGGCTGCGCCT CCAAAGACCATGTCATCAACTGCCTGCACCGGTTGATTGAAGCGCCGCCCCCTGAGCCCGTGCCTGTAGCTGCCCATCTG CAACTGAGCATTGAGCCTTTAAGCGATACCAGCCGTTACGAGCAATTAGGGGGTGGTTATGCACATTGA Protein sequence : MLDVALLSVIRRWYFREGLSKREIARRTGLSRNTLKKYLSQEQVEPAYPQRACVSKLDAFETLLTEALEREVKKPRKQRK TVKQLYHELVPQGYTGSYDRVAAFARLWRQQQTVSKQVYVPLQFAPGEAFQFDWGENWVSIGGKKVKVQVAHFKLCHSKV SYQRAYWTQTHEMLFDAHTQAFRVFGGVPERGIYDNMKTAVDKIGRGKERVVNKRFQAMASHYLFEADFCNPAAGWEKGQ VEKAVQDGRYALWHKAPGFNSLEALNDWLEQECQAVWQQQQHPEFKPHTLWQCLQEERLHLMHISSGFDGFIEHSKQVSS TCLITFENNKYSVPASFANRRVSLRVYPAVLHIIAEGRKVTEHLRVFTRDHNAPGQVLYNWRHYLLVAQRKPGSLRNGAP FQTLPESFKQLQQVLLRKIGGDRQMVDVLALVLHHEAELVEQAITEALQSGCASKDHVINCLHRLIEAPPPEPVPVAAHL QLSIEPLSDTSRYEQLGGGYAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 7e-132 | 56 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 3e-100 | 46 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 3e-86 | 42 |
