Gene Information

Name : Tlie_0900 (Tlie_0900)
Accession : YP_004932730.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : -
Position : 955565 - 956227 bp
Length : 663 bp
Strand : +
Note : PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: aco:Amico_0999 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synth

DNA sequence : 
ATGTTCACAGGACTTATTGAGGATGTAGGTAAGATAACATCCATAATTGCAAGAGGTGATGTTACCGTTGTTGAAATAGG
AGATACATTCATTGCCTCGGAACTAAAAAGAGGAAGCTCTGTTGCTGTGTCTGGAGCTTGTCTCACCGTGGTGGAGGTTG
TATCTTCTAACAGGTTCAAGGTGGAGATTATGGAAGAGACCAGGAATAGGACCACGTTAAGCAAGGCTAGAATAGGCTTG
AGGGTAAACCTTGAGAGGGCCCTTCCTGTGCAGGGGCGTTTCGATGGTCACATAGTGACCGGTCATGTGGATACATTAGG
AGAGGTAGTGGATATAGTAGATAAGGGTAGGACCCGACAGATTTTCATAAAGGTTCCCTCGGAGTGGGTTAAATATATAG
TGGAGAAAGGCTCTGTTGCTGTGGATGGGGTAAGCCTCACCGTGATAAGTGTGGAAGGTGATACCTTTAGCGTAGGGCTT
ATACCTACCACTCTTGCAGATACCACTATAGGAAGCGTACGTAAAGGGGACAGGGTTAACATAGAGTGTGATATATTGGC
TAAATATATTGCAAGGTTGATAAGCAGCGATAATAAATCACCCCCCTCTGATGAAGGCAGTTATGGCTTGAGTTTGGAGC
GACTCAGAGAGCTTGGGTGGTAA

Protein sequence : 
MFTGLIEDVGKITSIIARGDVTVVEIGDTFIASELKRGSSVAVSGACLTVVEVVSSNRFKVEIMEETRNRTTLSKARIGL
RVNLERALPVQGRFDGHIVTGHVDTLGEVVDIVDKGRTRQIFIKVPSEWVKYIVEKGSVAVDGVSLTVISVEGDTFSVGL
IPTTLADTTIGSVRKGDRVNIECDILAKYIARLISSDNKSPPSDEGSYGLSLERLRELGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 6e-32 41
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 6e-32 41