|
Name : Tlie_0721 (Tlie_0721) Accession : YP_004932551.1 Strain : Thermovirga lienii DSM 17291 Genome accession: NC_016148 Putative virulence/resistance : Virulence Product : two component transcriptional regulator, winged helix family Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 754641 - 755318 bp Length : 678 bp Strand : - Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: tai:Taci_0717 DNA sequence : ATGAAGATAATACTCATAGAAGACAACCGTGATTTGGTCCAAGTTTTGGCTGAAGGGTTGACCGAAAGCGGCTTCGTCGT AGATTATGCTTACGACGGAGAAGAAGGACTCAATAAGATCTTCAAAAATGAATACGAATGCATAGTACTGGACATCATGC TCCCCAAAACTGACGGATATGAGCTCATCAAGCAGGTCAGAGAGGCGGGAAAAGACACACCAATTCTGGTTCTAACAGCC AAGGACTCGGTGGAAGACAGGGTTAAAGGCCTGGAAGAAGGCGCTGACGACTACCTAGTGAAACCTTTCGATTTTAGAGA ACTTCTAGCACGCATAAATGCCCTTATAAGAAGGCATACGGAACACAAAAGACCTATCTTGCAGTGCGGCCCCCTCGTTT TGGACCCAGTGGCAAGAGAGTGCAGGGTAGACGGTGAGTTGATCCCCCTAAGGAAGAGAGAGTTTGATATACTTGAACTT CTAATGCGATACGAAAACCAAGTCTTCTCAAGGGAGAGAATCATTGCTCATGTCTGGAAGAAGGAATATGACGGCACCAG TAACGTGGTGGATGTCCACATAAAATACCTGAGAGACAAGTTGCGCCCCTACAATTTAGAGGGTATAGTAGCTACAGTAA GAGGCATAGGATATAAAATTTCCTGCCCCTACAGGTGA Protein sequence : MKIILIEDNRDLVQVLAEGLTESGFVVDYAYDGEEGLNKIFKNEYECIVLDIMLPKTDGYELIKQVREAGKDTPILVLTA KDSVEDRVKGLEEGADDYLVKPFDFRELLARINALIRRHTEHKRPILQCGPLVLDPVARECRVDGELIPLRKREFDILEL LMRYENQVFSRERIIAHVWKKEYDGTSNVVDVHIKYLRDKLRPYNLEGIVATVRGIGYKISCPYR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 5e-40 | 45 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 2e-39 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | BAC0125 | Protein | 4e-39 | 45 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | NC_010079.5776364.p0 | Protein | 9e-41 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | NC_002952.2859858.p0 | Protein | 9e-41 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | NC_007622.3794948.p0 | Protein | 9e-41 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | NC_003923.1003417.p0 | Protein | 9e-41 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | NC_013450.8614146.p0 | Protein | 9e-41 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | NC_002951.3238224.p0 | Protein | 9e-41 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | NC_007793.3914065.p0 | Protein | 9e-41 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | NC_002758.1121390.p0 | Protein | 9e-41 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | BAC0347 | Protein | 1e-38 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | BAC0197 | Protein | 1e-40 | 43 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | AE015929.1.gene1106. | Protein | 1e-34 | 42 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | CP004022.1.gene3215. | Protein | 2e-28 | 42 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | BAC0111 | Protein | 7e-43 | 42 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | BAC0083 | Protein | 6e-40 | 41 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | FJ349556.1.orf0.gene | Protein | 2e-31 | 41 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | BAC0308 | Protein | 3e-37 | 41 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | CP001918.1.gene5135. | Protein | 1e-21 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | VFG0596 | Protein | 2e-40 | 45 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | VFG1389 | Protein | 2e-34 | 44 |
| Tlie_0721 | YP_004932551.1 | two component transcriptional regulator, winged helix family | VFG1390 | Protein | 1e-39 | 41 |
