Gene Information

Name : Tlie_0540 (Tlie_0540)
Accession : YP_004932372.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 576946 - 578355 bp
Length : 1410 bp
Strand : +
Note : PFAM: Lyase; TIGRFAM: argininosuccinate lyase; COGs: COG0165 Argininosuccinate lyase; InterPro IPR000362: IPR009049: IPR020557: IPR003031; KEGG: aco:Amico_1512 argininosuccinate lyase; PFAM: fumarate lyase; PRIAM: Argininosuccinate lyase; SPTR: Argininosu

DNA sequence :
GTGTGGCACGGAAGGTTTAGAGAAGATACCGCCGAGGTGGTGCAGGAGTTCACCCAATCCCTTGATATGGACTGGAGATT
AGCCAAGTACGATATATACGGAAGCATAGCCCATGCCCGGATGCTTGGAGAGGTTGGAATCATAACCAAGGAGGAGTCCA
AGCTTCTGGAGGAAGGCCTTAGACAGGTCTTGAAGGAAATCCAAGAGGGGACTTTTTCTCCCAAACTTTCCCTGGAAGAT
GTTCACATGAACATAGAGGCCCGCCTGACGGAGCTTATTGGCCCAGTGGGGGCTAAGCTTCATACCGGCAGAAGCCGTAA
TGACCAATCGGCAACAACGGTCAGACTCTTTTTACGCAAAGAGATGGTCGATGTAGGAGATGGCCTGTTGACTTTAATGG
ATGCCTTGATAGACAGGGCAACGGCTCACAGGACCGTAATAGTGCCTGGCTACACCCACCTGCAGCAGGCTCAGCCCATA
AGCATGGGGCATTATTGGTTGTCCCATTTTTGGGCCTTTTCCAGGGACTTCAGAAGGGTGCTTTTTGCCTTGGATTCCAT
AGATGAGTGTCCCCTAGGGGCTGGAGCGCTGGCGGGCTCGACCCTTCCTCTGGACAGGGAGCACACTGCAAGGCTTTTGG
GCTTCAAGAAACCAACGGACAACAGCTTGGATTCGGTGGGGCACAGGGACCACATGTTGGACTGCCAGTATGCACTGGCG
GTGGTGATGCTTCATGTAAGCCGCCTTTCAGAGGATTTGGTCATATACGGTTCCAGGGAGTTTGGATGGCTTGACCTGCC
GGACTCTTTCTGCACTGGTTCAAGCATGATGCCCCAGAAGAAGAACCCAGATGTGTTGGAGTTGGCAAGGGGGAGGACCG
GCGGAGTTTACGGGGATCTTATAAACCTTGCCGTCACCATGAAGGCCTTGCCTTCGACCTACAACAGAGACATGCAGGAG
GATAAGCGCCCCCTATGGAACTCCCTTCAGGTGGTCAAGGACGTCCTTGAGGTGCTCCCTCTTCTGATATCCCGTGTTGA
GATAGATCAGGAAAAGGCCCTTGAGTCCTTCAGGGAGGGTTTCGCCCTGGCGACCGATGTGGCAGAGTACCTGGTCTTGA
AAGGTGTTCCTTTCAGAGAGGCTCACGCGAAGGTTGGAAAAGCCGTCAGGTGGTGCATAGACAACTACAAAGACCTGGAA
GAGTTGTCCTTGGAGGAGTGGAAAGAGCTCATTCCAGAGGTGGAGGAAGACCTGCTTGAACTCATGAGCCTTGAACAATC
GGTCAACAGAAGGGAAACCTACGGAGGGACTTCTTTCAAACAGGTGGCCCTTCAGATAGAAAGAGGCGTGAAGCTTCTTG
AGGAATACAGGGAAAGGCTTGCTCTATATCCAGCGAAGTTCTCACTTTAA

Protein sequence :
MWHGRFREDTAEVVQEFTQSLDMDWRLAKYDIYGSIAHARMLGEVGIITKEESKLLEEGLRQVLKEIQEGTFSPKLSLED
VHMNIEARLTELIGPVGAKLHTGRSRNDQSATTVRLFLRKEMVDVGDGLLTLMDALIDRATAHRTVIVPGYTHLQQAQPI
SMGHYWLSHFWAFSRDFRRVLFALDSIDECPLGAGALAGSTLPLDREHTARLLGFKKPTDNSLDSVGHRDHMLDCQYALA
VVMLHVSRLSEDLVIYGSREFGWLDLPDSFCTGSSMMPQKKNPDVLELARGRTGGVYGDLINLAVTMKALPSTYNRDMQE
DKRPLWNSLQVVKDVLEVLPLLISRVEIDQEKALESFREGFALATDVAEYLVLKGVPFREAHAKVGKAVRWCIDNYKDLE
ELSLEEWKELIPEVEEDLLELMSLEQSVNRRETYGGTSFKQVALQIERGVKLLEEYRERLALYPAKFSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 3e-85 48
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 3e-85 48