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Name : Tlie_0535 (Tlie_0535) Accession : YP_004932367.1 Strain : Thermovirga lienii DSM 17291 Genome accession: NC_016148 Putative virulence/resistance : Unknown Product : heat shock protein HslVU, ATPase subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 572539 - 573945 bp Length : 1407 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase su DNA sequence : TTGAATTTTTACAACGAGGAGGCTTTGACTCCCCGTAAGATAGTAGAATACCTTGGAAAGTATATTGTAGGACAGGAGAA GGCCAAAAGGGCGGTTGCCATAGCCTTGAGAAACAGGATGCGCAGAAAGAAGTTGCCCCAAGAGATGGCCAAGGAGATAA CTCCTAAGAACATCCTCATGGTGGGACCCACAGGAGTCGGAAAGACGGAGATAGCCAGGAGGCTTTCGCAGCTCGTAAAC GCCCCCTTTGTAAAGGTCGAGGCCACCAAGTACACCGAAGTGGGCTACGTGGGGCGAGATGTGGAGTCCATGGTTCGGGA CCTGGTGGAAAGGGCTTACCACATGGTTAAGGAGAAGCACTTGCAAGAGGTGCAAGAGGAAGCCTCAAGAAGGGTTGAAG AGAGGTTGCTTGATGCCCTTCTGCCCAGGAAAAGGGTCCAGGAAAAGGTTACGAACATGGTGGAGTTCCTGTTGGGTCAA GGTGACTCTAATGAAAGGGAAGAAGAGACAGAAGATCCCAAGCGTCAGGCCACCAGGGAGAAGTTACGAAGGCTCCTTAG GGAGGGCAAACTGGACGCCAGGGAGATTGAAATCGAAGTAGTTGAATCTGCGCAGGTAGGTATACCCATCTTGGGGGCCC CAGGCATGGACGAGATGGGTATAAACATTGGAGAGATGCTCAGCGGCCTGTTTCCCAAAAAGAAGAAGAAGGTCACCATG ACTGTTGCCGAAGCCAAGCGGGTGTTACAGGCCGAGGAGGCGGAGAAGCTCATAGACCACGAGGCAGTGTCTAAGGAGGC GGTCAGAAAGGCTCAGGAGGAAGGGATAATATTCATCGACGAACTGGACAAGGTAGCCTCTGCATCGAGTTCCACCTCGG GGCCGGACGTGAGTCGAGAGGGAGTCCAAAGAGACCTTCTCCCTATCATCGAAGGTTGTACAGTCAACACAAAATACGGC CCCATACGTACAGATCATATTTTATTCATAGGTGCAGGGGCCTTCCACAAGGTAAAACCCTCTGATCTGGTTCCGGAGCT TCAGGGTAGGCTGCCTCTAAGGGTTGAACTTGATCCTCTCACGGAGAATGACCTTGCAAGGATCCTTGTGGAACCCGAGA ACAGCCTTTTAAAGCAGTATAAGGCCTTATTGGAGACCGAAGGGGTAGAGCTGGTCTTCACGGAGGATGGGGTGGCGGAG ATAGCTTCGATAGCCGCAAGAATGAATATTGAGATGGAAAATATAGGAGCGAGAAGGCTGCACACCATAATGGAGGCCCT TTTGGAGGATATACAGTTTGAAGCTCCCGAGCGGAAAGGCGAAGTTATAACGGTGGATGCCAAGATGGTCAGGGAGAAAC TCCATGATGTAGTGGCCGACACAGATTTAAGGAAGTATCTTTTGTAA Protein sequence : MNFYNEEALTPRKIVEYLGKYIVGQEKAKRAVAIALRNRMRRKKLPQEMAKEITPKNILMVGPTGVGKTEIARRLSQLVN APFVKVEATKYTEVGYVGRDVESMVRDLVERAYHMVKEKHLQEVQEEASRRVEERLLDALLPRKRVQEKVTNMVEFLLGQ GDSNEREEETEDPKRQATREKLRRLLREGKLDAREIEIEVVESAQVGIPILGAPGMDEMGINIGEMLSGLFPKKKKKVTM TVAEAKRVLQAEEAEKLIDHEAVSKEAVRKAQEEGIIFIDELDKVASASSSTSGPDVSREGVQRDLLPIIEGCTVNTKYG PIRTDHILFIGAGAFHKVKPSDLVPELQGRLPLRVELDPLTENDLARILVEPENSLLKQYKALLETEGVELVFTEDGVAE IASIAARMNIEMENIGARRLHTIMEALLEDIQFEAPERKGEVITVDAKMVREKLHDVVADTDLRKYLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 6e-96 | 49 |
