Gene Information

Name : Tlie_0440 (Tlie_0440)
Accession : YP_004932272.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 468824 - 469756 bp
Length : 933 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: tte:TTE1863 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase;

DNA sequence : 
ATGGAATTGGCTGTCCATACAGTAGAACTCACTAAGAAGTATGGCTCCTTCACTGCTGTCGATAGGCTCAACCTCTCCAT
AAGGAAAGGGGAGGTGTTTGGGCTTTTAGGCCCTAATGGGGCCGGTAAAACCACCACTATATTGATGCTCCTGGGGTTGA
CCGAGCCCACATCGGGAAAAGCCGAGGTATTAGGGCATGATCCCGTGAAGGAGCCTATAGCGGTCAAGCGCATGGTTGGA
TATTTGCCCGAGAACGTGGACTTTTACGAGGACCTGACTGCCAGCGAAAACTTATTTTACATGGCGGGATTGAACGGTAT
ATCCTCTAAGGAGAGGGACAAAAAAGTTCCTCAGGTATTGGACATGGTGGGTCTTCTGGGCAGCAAGGACTCGCTAGTGG
GGACTTTTTCCAAAGGAATGAGACAAAGATTGGGGATAGCGGCGGTCTTGCTGAAAGATCCCAAGCTAGTGATACTTGAT
GAGCCCACCAATGGTATAGATCCTGAGGGCATAGAGAAGATACTGTCTTTGATAAGGTCCTTGGCCAAAGAGTTGGACGT
GACATTCTTGCTCTGTTCACACATGCTGTATCAGGTCCAAAGGGTATGTGACAGAGTGGGAATCATGTACAGAAGCTCTC
TTGTCGCCTCTGGAACCGTGGAGGAGGTAGGCAGGGCCATCTTAGGAGAGAGAAAAAGGATAATAAAGTTCAAGCCTGAG
GATAATACTATGCCAAAACTTGAAGACATAAAAGATCTGGAGGGTCTTTCTGAAGTTAAGGTTTTGGGAGACCACTTTGT
TGCACATTTTGACGAAGGCAAACTGCCCCTGGTTATGCGTGGCCTTTTGGATAGGGGGTTTGTTCCCTTTGAGGTGAGCG
GAAAGGACTATAGCCTGGAAGAAATTTATCTAAGGTATTTCCAGGGGGTGTGA

Protein sequence : 
MELAVHTVELTKKYGSFTAVDRLNLSIRKGEVFGLLGPNGAGKTTTILMLLGLTEPTSGKAEVLGHDPVKEPIAVKRMVG
YLPENVDFYEDLTASENLFYMAGLNGISSKERDKKVPQVLDMVGLLGSKDSLVGTFSKGMRQRLGIAAVLLKDPKLVILD
EPTNGIDPEGIEKILSLIRSLAKELDVTFLLCSHMLYQVQRVCDRVGIMYRSSLVASGTVEEVGRAILGERKRIIKFKPE
DNTMPKLEDIKDLEGLSEVKVLGDHFVAHFDEGKLPLVMRGLLDRGFVPFEVSGKDYSLEEIYLRYFQGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-22 41