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Name : Tlie_0036 (Tlie_0036) Accession : YP_004931879.1 Strain : Thermovirga lienii DSM 17291 Genome accession: NC_016148 Putative virulence/resistance : Virulence Product : two component transcriptional regulator, winged helix family Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 39980 - 40699 bp Length : 720 bp Strand : - Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: aco:Amico_168 DNA sequence : ATGCAATCTGAGCGCATCCTTGTGGTGGAGGATGAGGAGGCTCTCTCCGACATCTTGTCAGATGCCCTCAAGCGCCACGG GTACAAAGTAGAAAAGGCCTTCGATGGAGATACGGGACTTGAAATGGCAGAAAACCTCCTGCCCGACCTCATCATATTGG ATATAATGCTCCCTAAAATGGACGGCTGGGAAGTGTGCCGAAGATTGAAAGGGAATCCAAAGACCTCTAACATTCCCATA ATCCTGCTGACTGCCAGGAGGGACGAACGAGACGTCGTGGCTGGACTAGATTTGGGAGCCGATGACTACATACGTAAGCC CTTCTCATTGATAGAGCTCATGGCAAGGGTCAGAAGCGTACTGAGAAGGAGCAAGACCAAAAGCACAGAAAGTCCTTCTA TTCAAATAGGACCTCTGGAAATGGATTTTGAAAAACAGGTAGTAACCCTTGATGGAAAGACATTGGACTTGAGCCCTACG GAATACCACCTTTTAGAGATCCTGGCCCAAAACCCTGGCCGGGTCCTATCCCGAGAGGAGCTTCTGGCCAAGGGATGGGG CTACTATCTTGGAGACAGCAGGACCGTGGACGTTCACATTTCAAGGTTGAGAAGGAAGCTAGAGAAAGATCCTGAAAACC CAAAGATCCTGCATACCGTTCGGGGAAGGGGATATATGATCAAGTGGGAGGAAAAAGCGCATGAGAACTCTCAAAGGTAA Protein sequence : MQSERILVVEDEEALSDILSDALKRHGYKVEKAFDGDTGLEMAENLLPDLIILDIMLPKMDGWEVCRRLKGNPKTSNIPI ILLTARRDERDVVAGLDLGADDYIRKPFSLIELMARVRSVLRRSKTKSTESPSIQIGPLEMDFEKQVVTLDGKTLDLSPT EYHLLEILAQNPGRVLSREELLAKGWGYYLGDSRTVDVHISRLRRKLEKDPENPKILHTVRGRGYMIKWEEKAHENSQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 5e-25 | 41 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 3e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_002952.2859905.p0 | Protein | 1e-36 | 48 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_007622.3794472.p0 | Protein | 1e-36 | 48 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_009782.5559369.p0 | Protein | 1e-36 | 47 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_002951.3237708.p0 | Protein | 1e-36 | 47 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_002758.1121668.p0 | Protein | 1e-36 | 47 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_009641.5332272.p0 | Protein | 1e-36 | 47 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_013450.8614421.p0 | Protein | 1e-36 | 47 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_007793.3914279.p0 | Protein | 1e-36 | 47 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_003923.1003749.p0 | Protein | 2e-36 | 47 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_002745.1124361.p0 | Protein | 1e-36 | 47 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_012469.1.7685629. | Protein | 2e-35 | 46 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | AE000516.2.gene3505. | Protein | 1e-31 | 46 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_002758.1121390.p0 | Protein | 8e-34 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_010079.5776364.p0 | Protein | 8e-34 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_002952.2859858.p0 | Protein | 8e-34 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_007622.3794948.p0 | Protein | 8e-34 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_003923.1003417.p0 | Protein | 8e-34 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_013450.8614146.p0 | Protein | 8e-34 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_002951.3238224.p0 | Protein | 8e-34 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_007793.3914065.p0 | Protein | 8e-34 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | HE999704.1.gene2815. | Protein | 3e-34 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | AE015929.1.gene1106. | Protein | 7e-28 | 43 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | HE999704.1.gene1528. | Protein | 1e-23 | 43 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | BAC0197 | Protein | 1e-29 | 43 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | AF155139.2.orf0.gene | Protein | 3e-34 | 42 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | FJ349556.1.orf0.gene | Protein | 1e-29 | 42 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | CP000675.2.gene1535. | Protein | 2e-32 | 42 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_012469.1.7686381. | Protein | 6e-34 | 42 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | BAC0125 | Protein | 2e-29 | 42 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | BAC0083 | Protein | 2e-32 | 42 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | BAC0308 | Protein | 4e-30 | 41 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | BAC0111 | Protein | 5e-29 | 41 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | CP001138.1.gene2239. | Protein | 1e-28 | 41 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | CP000034.1.gene2186. | Protein | 5e-29 | 41 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | BAC0596 | Protein | 1e-28 | 41 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | BAC0039 | Protein | 5e-29 | 41 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | NC_002695.1.916589.p | Protein | 4e-29 | 41 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | AE016830.1.gene1681. | Protein | 1e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | VFG1390 | Protein | 8e-36 | 44 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | VFG1389 | Protein | 5e-31 | 43 |
| Tlie_0036 | YP_004931879.1 | two component transcriptional regulator, winged helix family | VFG0596 | Protein | 2e-25 | 41 |
