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Name : Tlie_0310 (Tlie_0310) Accession : YP_004932145.1 Strain : Thermovirga lienii DSM 17291 Genome accession: NC_016148 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 330539 - 331816 bp Length : 1278 bp Strand : - Note : PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656: IPR004681; KEGG: dat:HRM2_42860 DctM9; PFAM: TRAP C4-dicarboxylate transport sys DNA sequence : ATGATGACCATTATTGCTCTGACTTTCGCTGTTACGTTCGCCATTGGGATCCCCCTGGCATTGGTGTTGGGGCTCACCGG TCTTGCAGCACTGATAGCCATGGGCGTCCCCCTTCAAGTAGTAGCTCAAAGGATGTTCACAGGCATAGACTCCTTCCCAT TGATGGCCGTGCCCTTTTTCATCCTCGCTGGAGACATAATGAACAAAGGCGGCACAACCATACGGCTCATAAGATTTGCC AACAGCCTGGTGGGACACATAAGAGGAGGTCTTGCCCACGCGAACGTCGTGGCAAACATGCTCTTTGCGGGCATAAGCGG CTCTGCCGTGGCTGACGCCTCAGCCATAGGGGCCATAATGATACCATCCATGGAGAAAAGCGGATACGAGAAAGATTTCA GCGCCGCCTTAACTGCATCGGCGGCAACCATAGGCCCCATCATCCCGCCGAGCATAATCATGGTAATATACGGCGTCTCC GTGGGAGTATCAGTAGGGGGGCTATTCGCTGCAGGGTTTATCCCCGGAGTTCTTCTGGGTCTTGCTCTCATGGTGATCGT CTACAGCACATCCAAGAAGAAGGGTTATGCCAAGTACGACAACTTTTCACTGAAGAGGGTAGCTGTGGAATTCAAGGATG CCGTCTGGGCTATGATGGCTCCTGTGATAATCCTCGGAGGTATTCTGGGCGGCATATTCACTCCCACGGAAGCGGCAGCA GTTGCGGTAGTATACTCTTTCTTCGTCGGCAAGTTCGTCTTCAAGGAGCTCCAGTGGAAAGACCTCCCTGGAGTTCTTCT CCAAAGCGGGATAACCACCGCCACCATACTGCTCATAATATCCATGGCAAACGTCTTCGCCTGGGTCATAGCAGCGAACA TGATCCCCTTGAAGCTTGCCAATCTTTTCCTTTCCATAACGGAAAACCCTTACGTATTCCTCCTGTTGATAAACATCTTC CTGCTTTTCGTCGGCATGTTCATGGAGACTGGAGCTGCCATAATACTTTTGGCACCCATCCTTGCCCCTGTGGCAGCCAA GTTAGGTATTAACCCTCTGCATTTTGGTTTCATAATGGTATTGAACCTCGCCATAGGAATGGCTACCCCTCCCGTCGGGG TGTGCCTATTCGTGAGTTGCGGGATAACGGGTCTAAGCTTGGAGGAAATATCCAAGGCCGTCTATCCCTTCGTCCTTGCA GAGCTTGTCATACTCATGCTCGTAACCTACATAGAACCCATTTCCATGGTGTTGCCCAAGCTTTTGGGTTTCCTATAA Protein sequence : MMTIIALTFAVTFAIGIPLALVLGLTGLAALIAMGVPLQVVAQRMFTGIDSFPLMAVPFFILAGDIMNKGGTTIRLIRFA NSLVGHIRGGLAHANVVANMLFAGISGSAVADASAIGAIMIPSMEKSGYEKDFSAALTASAATIGPIIPPSIIMVIYGVS VGVSVGGLFAAGFIPGVLLGLALMVIVYSTSKKKGYAKYDNFSLKRVAVEFKDAVWAMMAPVIILGGILGGIFTPTEAAA VAVVYSFFVGKFVFKELQWKDLPGVLLQSGITTATILLIISMANVFAWVIAANMIPLKLANLFLSITENPYVFLLLINIF LLFVGMFMETGAAIILLAPILAPVAAKLGINPLHFGFIMVLNLAIGMATPPVGVCLFVSCGITGLSLEEISKAVYPFVLA ELVILMLVTYIEPISMVLPKLLGFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-59 | 45 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-59 | 45 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 3e-59 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tlie_0310 | YP_004932145.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 1e-59 | 45 |
