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Name : Tlie_1827 (Tlie_1827) Accession : YP_004933635.1 Strain : Thermovirga lienii DSM 17291 Genome accession: NC_016148 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1900949 - 1902829 bp Length : 1881 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: swo:Swol_0128 hypothetical protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: uncharacterized protein DNA sequence : TTGAATGGAGCAGCAAGAATTATAATCCTCATACTCATTGACAGCCTGTTAATAGCAGCAGCCCTCATGACGGGGCTTCT CCTTCGCTTTGAAGGAGATATACCGGGCCAGTATGTATCAGCTTTTCGTTATCTCCTTCCCTATTACATCCTGGTAAACA TAATATGTTTTTACCTGGGAAGGCTTTACCACCGCATGTGGCGGTATGCGAGCATAAGGGAGCTGTACGGCCTTTTAAAG GCAGCCACGGCCGGGGCAGTAATAATGGTGGTCCTTATTTATGCTTTGGGCTTTCCCACCCTGCCGCGCAGTGTATATAT ACTTTCCTGGTTTTTCATAATCGCGTTTGTAGGCAGTTCCCGTCTGGGATGGCGGCTTGTGCGGGATATGATGCTGGCAA ACAGGAATTCTCCATCTTCCCGCGTTCTAATTATAGGAGCCGGCGATGCAGGTGCCATGGTGGCAAGGGAAATAATGAAC AACAGGAAGCTTAACCTAGAGGCGGTAGGTTTCATCGATGATAATCCCATGAAGCAGAAGCTCAGCATTTACGGCATCCC GGTTTTAGGCACCAGGGAAGCAATACCCAGGATAGTAAGAGAGTATCACATAGATGAGATAATAATAGCCATGCCTTCCG CAGGAGGCAGGACCATCCGGGAGATTAACCAGATATGCCGGCAGATTGGGGCGAAGGCCCGCATATTCCAGGGAGCCGAT ACTCTCTTGGGCAGAAAATACCGCATAAAAGAAATAGAACTGGATGACCTACTGAAAAGGGAGCCGGTAAAGCTAAACCT GGATGAAATAGCCGGCTATCTTAAGGATAAAACTGTTCTGGTAAGCGGGGCCGGGGGCTCCATCGGCTCTGAACTGTGCC GGCAGATAGCCGTAAATAAACCGAAAAGGCTCATTCTCCTTGACTGCTCTGAAAATGACCTGTTTGAGATTGAAAATGAG CTGAGGGAAAATCTCCCTGCCCTTGATATCGTGCCGGAGCTGGCAGATATAAGAGATAAGGAACGGCTTATCCATATATT CGGCACCTGCAGGCCGCAGGTAGTATTCCATGCGGCTGCCTACAAACATGTGCCGATGATGGAAAAACACCCCCTGGAAG CGGTAAAAAACAACATCTTCGGTACCCGCAACCTGGCAGAAGCCGCGGATCGCTTTCAGTCGGAAACCTTTATCCTTATC TCGACCGACAAGGCGGTAAACCCGTCTAACGTCATGGGAGCTACCAAAAGGGCAGCCGAACTTATAATCCAGGAGATGAA CCATAAGAGCCAGACCACTTTTGCTGCCGTTCGTTTCGGCAATGTACTGGGCAGCAGGGGGAGTGTGGTTCCCATATTCA GAAAGCAGATTGAAAAAGGCGGACCGGTCACCGTAACCCATCCGGAAATGACCCGTTACTTCATGACTATACCGGAAGCG GTCCAGCTGGTAATCCAGGCAGGAGCCATGGCCATGGGAGGGGAAATATTTGTCCTGGACATGGGAGAACCCGTAAGAAT AATGGATCTGGCATATGACATGATAAGGCTCGTGGGCTACCAGCCAGGAGAAGATATTGAAATAAAGATTACCGGCATAA GGCCGGGAGAAAAACTGCATGAAGAGCTCTTTGCTGCCCGGGAGCAGATAGAGGCTACCCGGCATGAAAGGATATTCCTC TGCCATCTGCCTCCTCAAAATCTTAATATCCTGAACATGATAGACGAATGGGAAAAAACCATAACCAGAGCCAGAAGACT GGACAGGAAAGCAGTAATGGATTTCATACATTCCCTTATCCCGGAATTCCAGGCGGCAGGCGAAGTGGCCGCAGCCGATG AGCGAAAGGAGGCAGAAGGCAGGAAATGGGGGATGGGGTAG Protein sequence : MNGAARIIILILIDSLLIAAALMTGLLLRFEGDIPGQYVSAFRYLLPYYILVNIICFYLGRLYHRMWRYASIRELYGLLK AATAGAVIMVVLIYALGFPTLPRSVYILSWFFIIAFVGSSRLGWRLVRDMMLANRNSPSSRVLIIGAGDAGAMVAREIMN NRKLNLEAVGFIDDNPMKQKLSIYGIPVLGTREAIPRIVREYHIDEIIIAMPSAGGRTIREINQICRQIGAKARIFQGAD TLLGRKYRIKEIELDDLLKREPVKLNLDEIAGYLKDKTVLVSGAGGSIGSELCRQIAVNKPKRLILLDCSENDLFEIENE LRENLPALDIVPELADIRDKERLIHIFGTCRPQVVFHAAAYKHVPMMEKHPLEAVKNNIFGTRNLAEAADRFQSETFILI STDKAVNPSNVMGATKRAAELIIQEMNHKSQTTFAAVRFGNVLGSRGSVVPIFRKQIEKGGPVTVTHPEMTRYFMTIPEA VQLVIQAGAMAMGGEIFVLDMGEPVRIMDLAYDMIRLVGYQPGEDIEIKITGIRPGEKLHEELFAAREQIEATRHERIFL CHLPPQNLNILNMIDEWEKTITRARRLDRKAVMDFIHSLIPEFQAAGEVAAADERKEAEGRKWGMG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-102 | 48 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-97 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tlie_1827 | YP_004933635.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 7e-99 | 48 |
| Tlie_1827 | YP_004933635.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-82 | 43 |
