Gene Information

Name : Tlie_1811 (Tlie_1811)
Accession : YP_004933624.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Virulence
Product : undecaprenyl-phosphate galactose phosphotransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1883917 - 1884555 bp
Length : 639 bp
Strand : -
Note : PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: tte:TTE0665 lipopolysaccharide synthesis sugar transferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galac

DNA sequence : 
ATGAAGCTTTTTTTAAAAAGATTTTTCGATATATTGATTTCCTTTTTTTTGCTGGTTTTGTTTTTCCCTTTTATGTTGCT
GATTGCGCTGGCGGTATATCTAAATATGGGAAAACCGGTTATTTTCAGCCAGATTCGACCAGGCCTTGGGGGAAAGCCTT
TTAGTATGTATAAGTTTCGCACTATGACTGATGAGAGGGATGAAGAAGGAAATCTTCTTCCCGATGAGCAGAGGCTTACT
AGGCTGGGGATTTTTTTGCGGAGTACCAGTTTAGATGAACTGCCGGAGCTTTTTAATGTATTAAAGGGGGATATGAGTCT
GGTAGGGCCTCGGCCTCTTTTGATGCAGTATCTGACGCGTTATACACCGGAACAGGCGCGCAGGCATGAAGTAAAGCCAG
GAATAACAGGCTGGGCACAGGTTAACGGCCGAAATAATCTAACCTGGGAAGAAAGATTTAGGCTTGATGTATGGTATGTT
GACAATTGGTCATTGTGGCTGGATATAAAGATACTTTTCATGACATTGCTTAAGGTATTGAAAAGAGAAGGTATAAATGC
AGAGGGATGTGCTACTATGCCAGAGTTTATGGGAACAGAAATGCTGGTTGAAGCTGAGTCAGCCAGAGAAGAAGAATAA

Protein sequence : 
MKLFLKRFFDILISFFLLVLFFPFMLLIALAVYLNMGKPVIFSQIRPGLGGKPFSMYKFRTMTDERDEEGNLLPDEQRLT
RLGIFLRSTSLDELPELFNVLKGDMSLVGPRPLLMQYLTRYTPEQARRHEVKPGITGWAQVNGRNNLTWEERFRLDVWYV
DNWSLWLDIKILFMTLLKVLKREGINAEGCATMPEFMGTEMLVEAESAREEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 6e-25 44
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tlie_1811 YP_004933624.1 undecaprenyl-phosphate galactose phosphotransferase VFG1369 Protein 7e-22 44