Gene Information

Name : Tlie_1802 (Tlie_1802)
Accession : YP_004933617.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1877711 - 1878586 bp
Length : 876 bp
Strand : -
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; COGs: COG0214 Pyridoxine biosynthesis enzyme; InterPro IPR001852: IPR013798; KEGG: fno:Fnod_1751 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protei

DNA sequence : 
ATGGAAAAAGGCACATGGGAAATCAAAAAGGGATTTGCGGAGATGTTCAAGGGCGGAGTGATAATGGATGTAACCACTGC
GGAACAGGCAAGGATTGCAGAACAAGCTGGAGCAGTTGCGGTTATGGCTCTTGAGAGGGTTCCGGCGGATATCCGAAAGG
CCGGAGGCGTGGCCAGAATGGCCAAGATAAGCAAGATCAAGGAAATAATGGAGGCCGTGTCGATTCCCGTAATGGCCAAG
GTCAGAATCGGCCACATTGTAGAAGCCCGGATCCTAGAAGCTATGGGAGTGGATTTCATAGACGAGTCTGAAGTTTTGAC
TCCGGCGGACGATAAATATCACATCGATAAGCACAACTTCAGCGTGCCGTTTGTGTGCGGGGCTAGAAACTTGGGAGAGG
CTCTAAGAAGGATTGCAGAGGGAGCTGCCATGATAAGGACCAAGGGCGAAGCAGGGACAGGAAACATCGTTGAAGCTGTA
AAACACATGCGAACCGTCATGTCAGAGATAAGAAGAGTGCAAGGCATGCCTTTTGAGGAACTGGCAACTTACGCAAAGGA
GATACAAGCGCCAGTGGAGCTTCTGCAAAAGATCAAGGAGCTAGGAAGGTTGCCGGTGGTCAACTTTGCTGCAGGAGGAG
TGGCTACGCCTGCCGATGCTGCTTTGATGATGGAGCTGGGGGCTGATGGAGTGTTTGTGGGGAGCGGAATTTTCAAATCT
AAGGATCCCGAAAAGATGGCAAGGTCCATAGTAATGGCAGTAACTTATTGGAGCGATCCAGAAATGCTGCTTAAGGTTTC
AGAGGACATAGGAGAACCCATGGATGGATTAGAGATTGAAACCCTGGAAGTAAAACTCCAAGAAAGAGGATGGTAG

Protein sequence : 
MEKGTWEIKKGFAEMFKGGVIMDVTTAEQARIAEQAGAVAVMALERVPADIRKAGGVARMAKISKIKEIMEAVSIPVMAK
VRIGHIVEARILEAMGVDFIDESEVLTPADDKYHIDKHNFSVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNIVEAV
KHMRTVMSEIRRVQGMPFEELATYAKEIQAPVELLQKIKELGRLPVVNFAAGGVATPADAALMMELGADGVFVGSGIFKS
KDPEKMARSIVMAVTYWSDPEMLLKVSEDIGEPMDGLEIETLEVKLQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-75 65
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 5e-75 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-75 64