Gene Information

Name : Tlie_1776 (Tlie_1776)
Accession : YP_004933594.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 1850632 - 1851063 bp
Length : 432 bp
Strand : -
Note : PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: adg:Adeg_1934 protein-tyrosine phosphatase, low molecular weight; PFAM: Protei

DNA sequence : 
GTGAGCAAAAAAACAAAGGTTCTTTTTTTATGCACCGGAAACTCTTGTAGAAGTCAAATGGCTGAAGGGTGGGCAAAAGC
GTTAAAGGGAGATGTTATAGAGGCTTACTCTGCTGGTACGGCTCCCAGCACGGTGAACCCCCTTGCCATAAAAGTCATGA
AAGAGGCAGGAGTGGACATCTCCAACCAGCGAAGTAAAAACGTCACGGAGCTTTTGGACGTGAAGTTCGACGTGGTCATA
ACTCTCTGCGGCGATGCCAAAGACACCTGTCCGGTGTTCCCAGGAGATACCAGGGTGGTTCACAGGGGCTTTGATGATCC
TGCTAGGGCAGAGGGCAGCGAAGAGGAAGTTTTGGCTTTCTTCAGGAGGGTAAGGGACGAAATAAGGGATTTCGTGAAGA
CCCTGCCCGAAAGCGTTATGCAAGAGGATTGA

Protein sequence : 
MSKKTKVLFLCTGNSCRSQMAEGWAKALKGDVIEAYSAGTAPSTVNPLAIKVMKEAGVDISNQRSKNVTELLDVKFDVVI
TLCGDAKDTCPVFPGDTRVVHRGFDDPARAEGSEEEVLAFFRRVRDEIRDFVKTLPESVMQED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 3e-23 52
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 5e-24 49
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 3e-24 49
BCAM0234 YP_002232865.1 putative arsenate reductase Not tested BcenGI11 Protein 1e-13 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tlie_1776 YP_004933594.1 protein tyrosine phosphatase BAC0581 Protein 2e-30 57
Tlie_1776 YP_004933594.1 protein tyrosine phosphatase BAC0032 Protein 2e-24 51
Tlie_1776 YP_004933594.1 protein tyrosine phosphatase BAC0580 Protein 5e-24 49