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Name : Tlie_1729 (Tlie_1729) Accession : YP_004933548.1 Strain : Thermovirga lienii DSM 17291 Genome accession: NC_016148 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1800586 - 1801878 bp Length : 1293 bp Strand : - Note : PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681: IPR010656; KEGG: sit:TM1040_2749 TRAP dicarboxylate transporter-DctM subunit; PF DNA sequence : ATGACTGGCTTTATAACTGCCGTGTTCGTGATATTTCTCGTAGTGGGCATGCCCATAGGCTTTGTCTTGGGGGTTACTGG ACTTCTTTCCATGCTCAAGATGAACGTTCCCTCCATACTTCAGTTAGTGCCCCAGCGATATTTTGCGGGAGTGGATATGT TCACCCTCATGGCCATGCCCTTTTTCATCTTGGCTGGAGACATAATGAACAAGACGGGTATCACTCAGAAGCTCGTAAAG TTCAGCAACGTACTTGTGGGGCACCTTCAGGGTGGGCTTGCACATGCAAATATAGTGGCCTCGGTGTTCTTTGCCGGACT TACTGGAGCAGCCGTAAGCGATACAGCAGCTATAGGCTCCATGCTTATTCCAGCCATGGTTGAGGAAGGGTACGACAAGG ATTTTTCTGCGGCAGTTACAGCGTCTTCATCAATCATAGGGCCCACAATCCCTCCCTCCAACATAATGGTCATCTACGGG GCGTTCATGCAGGTCTCCATAGCTGGGTTGTTTTTGGCAGGCATCCTTCCGGGGATACTGGTTGCCGTAGCACTGATGAT ACTAACTGCGAGGATATCCAAAAAGAGAGGTTATCCCGTCGGTCAAAGACGGGCTACGCTGAAAGAGATGATCCTTGCCT TTAAGGAGGCCTTTGTGGCTCTCCTTATGCCCATAATCATCCTGGGTGGAATTCTAAGCGGTGTTTTTACCCCGACGGAG GCTGCGGCGGTAGCTGTTGCCTATGCCTTGTTCGTGGGCTTCGTAGTATATCGAAGCATAACCGTGAGAGACCTGGTTCC CATTTTCATCAAGATGGCCAGAACTACCGGAGTGGTTTTCTTGGTAATAGCTGCTGCCTCCATATTGGGGTGGGTGCTCA CCATGGAGCAGATTCCGGAAAAGGTCGCTAATCTTATGTTGGGTATAAGCACCAACAAATGGGTTGTCATGGGAATGATA CTCCTTCTTCTGCTTTTCGTAGGAATGTTCATGGACATAGCGGCGGCTCTCATAATCCTTGGTCCCATCCTTCACCCGTT GGCCGTGAAGATGGGCTTTCATCCCCTCCATTTCGGCATAATAATGGTTCTTTCCCTCAACATAGCCTTGATGACTCCGC CGGTGGGGGCGTGCCTGTTCGTAGCCTGTGGCATAAGTAGGCTGACCATAGAGCAGCTGAGCAGAGAGATATTCCCTTTT ATTCTTGTTGTGGTTTCTGTTCTCATATTGATAACTGTATTTCCCGGTATACCCCTTTTCCTCCCAAGGCTCATGGGCTA CGCGCCTTGGTGA Protein sequence : MTGFITAVFVIFLVVGMPIGFVLGVTGLLSMLKMNVPSILQLVPQRYFAGVDMFTLMAMPFFILAGDIMNKTGITQKLVK FSNVLVGHLQGGLAHANIVASVFFAGLTGAAVSDTAAIGSMLIPAMVEEGYDKDFSAAVTASSSIIGPTIPPSNIMVIYG AFMQVSIAGLFLAGILPGILVAVALMILTARISKKRGYPVGQRRATLKEMILAFKEAFVALLMPIIILGGILSGVFTPTE AAAVAVAYALFVGFVVYRSITVRDLVPIFIKMARTTGVVFLVIAAASILGWVLTMEQIPEKVANLMLGISTNKWVVMGMI LLLLLFVGMFMDIAAALIILGPILHPLAVKMGFHPLHFGIIMVLSLNIALMTPPVGACLFVACGISRLTIEQLSREIFPF ILVVVSVLILITVFPGIPLFLPRLMGYAPW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 9e-49 | 43 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 7e-49 | 43 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 9e-49 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tlie_1729 | YP_004933548.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 4e-49 | 43 |
