Gene Information

Name : Tlie_1638 (Tlie_1638)
Accession : YP_004933457.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1702652 - 1703356 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: ate:Athe_1574 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC trans

DNA sequence : 
ATGAAAAAAAACATCATAGCGCTTCACAAAATAACTAAGATTTATCGTATGGGTGAATTTAAAGTACACGCATTAAAAGG
AATAGACCTAAAGGTCGCAGAGGGTGAATTCATCGCCGTGATGGGTCCCTCAGGATCTGGAAAATCCACCTTGATGAGTA
TCTTGGGATGTTTGGACGTGCCGACTTCCGGAGAATATGTGCTCGATGGGAAGGAAGTCAGTAAATTGAGCAAGGATCAG
CTGGCGTGCGTTCGAAACGCCAAAATAGGCTTTGTGTTCCAGAACTTTAACTTGCTTCCGCAGATGTCTGCCATAGAAAA
CGTGGAGCTTCCCATGATGTATAAAGGAATCAAAAAACCATTACGTACTAAAATCGCAAGAGATTGCCTCGCCATGGTGG
GGTTACACGGCAGAGAGCACCACAAGCCCACTCAATTGTCGGGAGGGCAAAGGCAGCGTGTAGCAATAGCAAGGGCCTTG
GCCAATAATCCGTCGATCATACTGGCAGACGAACCTACGGGCAATCTGGACAGCGCAGTCAGTCACGAAATAATGGAGCT
TTTTTCCAGGCTCAACGACGAGGCCAAAGTAACCATAATATTAGTAACCCACGAGCATGACATCGCTTCCTTCGCCAAAA
GAACCATAACGTTAAGAGATGGAATCATTCTATCGGGGGAGACTGAAAATGATACATCCATTTGA

Protein sequence : 
MKKNIIALHKITKIYRMGEFKVHALKGIDLKVAEGEFIAVMGPSGSGKSTLMSILGCLDVPTSGEYVLDGKEVSKLSKDQ
LACVRNAKIGFVFQNFNLLPQMSAIENVELPMMYKGIKKPLRTKIARDCLAMVGLHGREHHKPTQLSGGQRQRVAIARAL
ANNPSIILADEPTGNLDSAVSHEIMELFSRLNDEAKVTIILVTHEHDIASFAKRTITLRDGIILSGETENDTSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tlie_1638 YP_004933457.1 ABC transporter NC_012469.1.7686878. Protein 3e-63 58
Tlie_1638 YP_004933457.1 ABC transporter NC_008702.1.4606598. Protein 2e-46 48
Tlie_1638 YP_004933457.1 ABC transporter CP001581.1.gene798.p Protein 4e-41 46
Tlie_1638 YP_004933457.1 ABC transporter CP001581.1.gene598.p Protein 1e-38 42