Gene Information

Name : Tlie_1557 (Tlie_1557)
Accession : YP_004933376.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 1619473 - 1620366 bp
Length : 894 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: aco:Amico_0033 ABC transporter relat

DNA sequence : 
GTGAGTGACGTAGCCATAGCAGTCGAGGAGCTTTGGAAAGTATATTCGAAATCTAAGTCGGGTAAGGTAGTGATAGACGT
AGATGACGAGGAGCTAATGAGATCTATAGAGGCCTCTAGTGAGGATGTAGTGGCCGTAAGGGATCTGTCCTTTGAGGTGA
AAAAAGGCGAAGTGTTCATAGTCATGGGGCTTTCGGGCAGCGGGAAATCCACGCTGATACGCTGCCTTATAAGGTTGGTT
GAACCAAGCTATGGCAAGATAACCATAAACGGCTATGACGTCACGGCGATGGACAAAAAAGAGCTGACGGAGTTCCGGCG
ATACCAGACGGCCATGGTATTTCAGCATTATGGGCTTTTGCCTCATAAAACAGTCCTGGATAATGTGGCCTTTGGTCTGA
AGCTTAGAGGGGTTCCCAAGAAAGAAAGAAGGGAAAAGGCCATGCACGCCCTCGAGATAGTGGGCCTTGAGAAATGGGCC
AGTTATTATCCTTCTTCGCTGAGTGGAGGAATGCGCCAGAGAGTAGGGATCGCAAGGGCCCTTGTGGCTGATTCCCCTAT
ACTCCTAATGGATGAACCTTTTAGTGGCTTGGATCCCTTGATACGTAGGGAGATGCAGGACGAATTGATTCGCCTGCAGG
AAGAAATGCACAAGACCATATTCTTTGTCACTCACGATTTGGACGAGGCAATGCGCCTCGGTGACAGGATGGCGGTGATG
AAGGATGGCAGCATAGTTCAGATAGGCAAACCCGCCGAGGTCTTTGCCAATCCTGCCAACGACTACGTAGCTCGCTTCGT
TCAGGATAGAAGGGAAGAAATCAGAAAGGCCGATGAACAGATAGCAGCTCTCAACGCGGCAAATGATAAAGAGGTGAATA
GCGATGTTTCCTGA

Protein sequence : 
MSDVAIAVEELWKVYSKSKSGKVVIDVDDEELMRSIEASSEDVVAVRDLSFEVKKGEVFIVMGLSGSGKSTLIRCLIRLV
EPSYGKITINGYDVTAMDKKELTEFRRYQTAMVFQHYGLLPHKTVLDNVAFGLKLRGVPKKERREKAMHALEIVGLEKWA
SYYPSSLSGGMRQRVGIARALVADSPILLMDEPFSGLDPLIRREMQDELIRLQEEMHKTIFFVTHDLDEAMRLGDRMAVM
KDGSIVQIGKPAEVFANPANDYVARFVQDRREEIRKADEQIAALNAANDKEVNSDVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-42 49
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-42 49