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Name : Tlie_1255 (Tlie_1255) Accession : YP_004933083.1 Strain : Thermovirga lienii DSM 17291 Genome accession: NC_016148 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1311705 - 1313210 bp Length : 1506 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR018149: IPR004365: IPR004364: IPR006195: DNA sequence : ATGCTAGAGAAAAAAGACGATCTTTTAATGTCTGAAGATGAAATTTTAAAGCAAAGAACAGATAAACTAAGAAGGCTCAG AGAGGAAGAGGGATACGACCCATTCAAGGTAGAAAAATGGGATAGGCGGCACACCTTGGGTTACGTGAAGGAAAAGTACG ATTACTTGCAACCTGATGAGGTGGCTGAAGAGGGAATAAGCACCGCTGGGCGCATAATGACCATAAGAAGGCACGGCAAG GCGGCCTTCCTGGACTTGGCGGATGAGTATGATACTATCCAGCTTTGTTTCCAACAGAACGTAGTTGGAGAAGAGCAGTA TACCTTTTTTAAAAAATGGGTTGACACCGGTGATTTCCTTGGAGTGGTGGGAGTGCCCATCAGAACGAGGCGAGGAGAAC TCTCTATTTTGGTGAAAGAGTTCAAGCTTCTTTCCAAGGCATTGAGGCCACTTCCAGAGAAGTGGCACGGCTTGAAGGAT ACCGAGATACGTTACAGGCACAGATACGTAGATCTGATAGCCAACCCAGAGGTGAGAGAAACATTCCGCAAAAGAGCGAA GATAATAAATGCCATTCGCAGTGTCCTGGAAAAACATGGGACCATAGAAGTGGAGACCCCCATTTTGTCGCCTATAGCTG GGGGTGCCAACGCAAGACCCTTCATCACTTACCATAATGCTTTGGGGATAAATCTTTATCTTCGCATAGCAACGGAACTT TACCTCAAGAGGCTGATAGTCGGCATGTTCGGTAGAGTGTACGAAATAGGCAAGAACTTTAGAAATGAAGGTATTGACAC AATGCATAACCCCGAGTTTACGGCAATGGAAGTGTATTGGGCCTATGCAGATTACGAGGACATAATGAATTTGACTGAAG AGTTGATCGTCGCTGCTGCAGATGCCGTGGGGGGAAGAAGGATAAATTACCAGGGAACTGAGCTGATTCTGGAACCTCCT TTCAGAAGAGCTACAATGAAGGAACTTGTTAAGGAATATTGCGGATACGACCTGGATGAAATAAAGTCCGATGAAGAGGC CAGGGCGTTCGCCAAGAAGAAGGGGTTGGAAATAAAGGGTACAGAGAGCCGCTTTGTCATATTGGCTGAGCTGTTTGAGA CGTTTGTGGAGGATAAGCTGATTCAGCCTACCTTCGTAATTGGCCATCCTACCGAAATTTCGCCTTTGGCTAAAAGAAAT CCTGATAATCCGGACTTTACAAACAGGTTCGAGCTTTACATTTATGGCAACGAAGTGGCTAACGCCTTTAGTGAACTTAA CGATCCCCTGGATCAGCGAGAGAGATTTTTGGATCAGGCTAAGAAGAAAGAAGAAGGCGATGAGGAAGCCCACGCCTTCG ATGAGGACTACATAATGGCCCTAGAGTACGGCCTTCCCCCCACGGGAGGACTTGGAGTGGGAATCGACAGATTGACCATG TTCTTGACCGACTCTAAATCTATAAGAGATGTAATACTTTTCCCGACCATGCGTCCCAAACAGTAA Protein sequence : MLEKKDDLLMSEDEILKQRTDKLRRLREEEGYDPFKVEKWDRRHTLGYVKEKYDYLQPDEVAEEGISTAGRIMTIRRHGK AAFLDLADEYDTIQLCFQQNVVGEEQYTFFKKWVDTGDFLGVVGVPIRTRRGELSILVKEFKLLSKALRPLPEKWHGLKD TEIRYRHRYVDLIANPEVRETFRKRAKIINAIRSVLEKHGTIEVETPILSPIAGGANARPFITYHNALGINLYLRIATEL YLKRLIVGMFGRVYEIGKNFRNEGIDTMHNPEFTAMEVYWAYADYEDIMNLTEELIVAAADAVGGRRINYQGTELILEPP FRRATMKELVKEYCGYDLDEIKSDEEARAFAKKKGLEIKGTESRFVILAELFETFVEDKLIQPTFVIGHPTEISPLAKRN PDNPDFTNRFELYIYGNEVANAFSELNDPLDQRERFLDQAKKKEEGDEEAHAFDEDYIMALEYGLPPTGGLGVGIDRLTM FLTDSKSIRDVILFPTMRPKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-100 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tlie_1255 | YP_004933083.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-100 | 48 |
