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Name : Tlie_1225 (Tlie_1225) Accession : YP_004933053.1 Strain : Thermovirga lienii DSM 17291 Genome accession: NC_016148 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1279182 - 1279634 bp Length : 453 bp Strand : - Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; COGs: COG0691 tmRNA-binding protein; InterPro IPR020081: IPR000037; KEGG: aco:Amico_1350 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGGCAAGGACGGTTGTAGCCAGAAATAAGAAGGCGCGGCATGACTATTTCATAATTGAAACTTATGAAGCGGGCATCCA GCTTACTGGCACCGAGATAAAATCTGTGCGAGCTGGAAAGGTGAACTTGAAAGATGGTTATGCTAGAATAATCGGCTCGG AAGTCTGGCTATACAATGTACATATTTCTCCATACGAAAAAGGTACGTATTATAATCACGATCCTTTGAGGCCAAGAAAG CTTCTTTTAAGGTCTGAGGAGATAAAAAGGCTTATTGGCAAGATAAAAGAAAAGGGTTTGACTCTTGTGCCTCTTGAAAT GTATTTGAAGGACAATAAGTGGGCCAAAATAGAGTTGGCGCTGGTTAAAGGAAAGACCAAACATGACAAGAGAGAATCTA TAGCCGAGCGTGATGCCAAAAGAGCAATGGAGAAAGCTCTGAAGAGGCACTAG Protein sequence : MARTVVARNKKARHDYFIIETYEAGIQLTGTEIKSVRAGKVNLKDGYARIIGSEVWLYNVHISPYEKGTYYNHDPLRPRK LLLRSEEIKRLIGKIKEKGLTLVPLEMYLKDNKWAKIELALVKGKTKHDKRESIAERDAKRAMEKALKRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 9e-30 | 51 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 5e-31 | 48 |
