Gene Information

Name : Tlie_1041 (Tlie_1041)
Accession : YP_004932871.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 1099505 - 1100452 bp
Length : 948 bp
Strand : -
Note : PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR006130: IPR002

DNA sequence :
ATGGCTGTAAATTTGAAGGGAAGACATTTTCTCACACTTTTGGATTTCACCCCGGAGGAAATAGAATACTTGATCGATCT
TTCTGCTTCTTTAAAACTGAAAAAACGCGCAGGCATAAGAGGAAATGCACTGGAAGGTAAAAGTGTTGCCCTTCTATTTG
AAAAACCTTCCACAAGGACAAGGTGCGCATTTACTGTCGCTTGCATCGATGAGGGAGGACATCCAGAATACTTGGGGAAA
AACGACATTCAATTAGGGCACAAGGAAAGCGTAAAGGATACCGCGAGAGTTCTAGGCAGAATGTTTGATGGCATCCAATT
CAGAGGGTTCAAACAAGAAACAGTGGAAGAGCTCGCTAGGTACGCTGGCGTTCCCGTATGGAACGGTTTGACCGACATGT
ATCACCCAACCCAGATATTGGCTGACTTTCTCACGATAAAGGAAAATTTTGGGTACCTGAAGGGAATAAAGCTTGTCTTT
GTGGGTGACGGCAGAAACAATATGGCGAACTCTATGATGATCGGTTCGGCCAAGTTGGGCTTACATTTTGCTATAGCTTC
CCCGGAAGGGTTGAGACCTTCAGACGAACTTGTCAAAAAGTGCGAAGAGTTCAACAAGGTTTCTGGCGGGACAATTGAAT
TTTTCGAAGACCCGAAAGAAGCAGTAAAAGGAGCCCACGCAATATATACGGATGTGTGGGCCTCTATGGGGGAGGAGAGC
AAGCTCGCCGAACGCATTGCCCTTTTGAAGCCCTATCAAGTTAATAAAGAGCTTATGGCCGCTTCCGGTCGCAATGACAC
TATCTTCCTTCACTGCTTACCTGCAGTAAAAGGAAACGAAGTTACGGAAGATGTATTCGAATCACCTCAATCCAAAGTTT
TCGATGAAGCAGAGAACAGACTTCACACTATAAAAGCAGTAATGGTGGCAACGATAGGAAACGTTTAA

Protein sequence :
MAVNLKGRHFLTLLDFTPEEIEYLIDLSASLKLKKRAGIRGNALEGKSVALLFEKPSTRTRCAFTVACIDEGGHPEYLGK
NDIQLGHKESVKDTARVLGRMFDGIQFRGFKQETVEELARYAGVPVWNGLTDMYHPTQILADFLTIKENFGYLKGIKLVF
VGDGRNNMANSMMIGSAKLGLHFAIASPEGLRPSDELVKKCEEFNKVSGGTIEFFEDPKEAVKGAHAIYTDVWASMGEES
KLAERIALLKPYQVNKELMAASGRNDTIFLHCLPAVKGNEVTEDVFESPQSKVFDEAENRLHTIKAVMVATIGNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 3e-81 55
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-80 54
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-80 54
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-80 54
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-80 54
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-80 54
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-80 53