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Name : DSC_05650 (DSC_05650) Accession : YP_004929822.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 1015833 - 1016840 bp Length : 1008 bp Strand : - Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation DNA sequence : ATGCCTTCCACCGCGCACCACCGCGTTCCTGCAGACGATGCCGCCCTGGCCGCCAGTGGCCGGCGTGCCGTGCAGATCGA AGCCGATGCGCTGATCGCGCTGGCCCGGCGGATCGATGGCCCGTTCTCGGCCGCCTGCCGGGCGATCCTGGCCGGCAGCG GACGGGTGGTCGCGATGGGCATGGGCAAGTCCGGGCACATCGCGCGCAAGATCGCCGCGACCCTGGCCTCGACCGGCACC CCGGCGTTCTTCGTCCATCCCGGCGAAGCCGGGCACGGTGATTTCGGCATGATCACCGACGCCGACCTGGTCCTGGCGAT CTCCTACTCGGGCGAGTCGGACGAGATCCTGATGCTGCTGCCGCTGCTGCGGCGCCAGGGCAATGCGCTGATCGCCATGA CCGGCAAGCCGGCCTCGACCCTGGCCCGCGCCGCCGACGTACACCTGGATGTCAGCGTTCCGGCCGAAGCCTGCCCACTG CACCTGGCGCCCACCAGCAGCACCACCGCCACCCTGGCCATGGGCGATGCGCTGGCCGTGGCCCTGCTGGAAGCGCGCGG CTTCACCTCCGAGGACTTCGCCCGCTCGCATCCGGCCGGCAGCCTGGGCCGCCAGCTGCTGCTGCACATCAGCGACCTCA TGCACACCGGCCAGGAGATCCCCGCGGTCCCGGCCGAGGCCACCCTGGCCCAGGCCCTGGTCGAAATGAGCCGCAAGCGG CTGGGCATGACCGCGGTGGTCGATGCCGACCAGACGCTGCTGGGCATCTTCACCGACGGCGACCTGCGCCGCGCCCTGGA TACCGTGGGCCTGGATATCCACAGCACGTCCATCGCCTCGGTAATGACCCGCAACCCGGTCACCATCGGCGCCCAGGCGC TGGCCACCGAGGCAGCGCGGCTGCTGGAAACGCGCAACATCGGCAGTGGCCTGATCGTGGTCGACGCCGAGCGGCGGGTG ATCGGCGCGCTCAATGTTCACGACCTGTTGCGCGCGCGCGTGGTGTAA Protein sequence : MPSTAHHRVPADDAALAASGRRAVQIEADALIALARRIDGPFSAACRAILAGSGRVVAMGMGKSGHIARKIAATLASTGT PAFFVHPGEAGHGDFGMITDADLVLAISYSGESDEILMLLPLLRRQGNALIAMTGKPASTLARAADVHLDVSVPAEACPL HLAPTSSTTATLAMGDALAVALLEARGFTSEDFARSHPAGSLGRQLLLHISDLMHTGQEIPAVPAEATLAQALVEMSRKR LGMTAVVDADQTLLGIFTDGDLRRALDTVGLDIHSTSIASVMTRNPVTIGAQALATEAARLLETRNIGSGLIVVDAERRV IGALNVHDLLRARVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-49 | 44 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-49 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-49 | 42 |
