|
Name : DSC_05090 (DSC_05090) Accession : YP_004929712.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Unknown Product : ATP-dependent Clp protease subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 895565 - 898150 bp Length : 2586 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGCGGATGGACAAACTCACTTCGCGCTTCCAGCAAGCCCTGGCCGATGCCCAGTCGCTGGCCGTGGGCCGCGACCACAA CTTCATCGAACCGGTGCACCTGATGGTGGCGCTGCTGGATCAGTCCGGCGGTAGCACCCGCGCGCTGCTGCAGCAGGCCG GGGTCAACGTGCCGGTGCTGCGCGAGCGCCTGGGCGAGTCGCTGGAGGCACTGCCCAAGGTCACCGGCCAGGCCGGCAAC CTGTCGGTGGGCAACGACCTGGGCCGCCTGCTCAACCAGACCGACAAGCTGGCCCAGCAACATGGCGATGCCTTCATCGC CAGCGAGTGGTTCGTGCTGGCGGCGGTGGAAGACAATGGCCCGCTGGGCCTGGCCTTGCGCACGGCCGGTGCCGACAAAA AGAAGGTCGAAGCAGCCATCGACAAGATCCGCGGCGGCGAGAGCGTGCAGTCCGAAAACGCCGAGGACCAGCGCCAGGCG CTGGAGAAATACACCATCGACCTGACCGCACGCGCCGAGAGCGGCAAGCTGGATCCGGTGATCGGCCGCGACGAGGAGAT CCGCCGCACCATCCAGGTGCTGCAGCGCCGGACCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGCGTGGGCAAGACCG CGATCGTCGAAGGCCTGGCCCAGCGCATCGTCAATGGCGAGGTGCCGGAGAACCTGAAGAACAAGCGGGTGCTGTCGCTG GACATGGGCGCGCTGATCGCCGGCGCCAAGTTCCGCGGGGAATTCGAGGAGCGTCTGAAGGGCGTGCTCAATGACCTGGC CAAGAGCGAGGGCCAGATCATCCTGTTCATCGACGAGCTGCACACCATGGTCGGCGCCGGCAAGGCCGAGGGCTCGATGG ATGCGGGCAATATGCTCAAGCCGGCGCTGGCCCGTGGCGAGCTGCACTGCGTCGGTGCGACCACGCTGGACGAGTACCGC AAGTACATCGAGAAGGATGCCGCGCTCGAGCGCCGCTTCCAGAAGGTGTTTGTCGGCGAGCCGTCGGTGGAAGACACCAT CGCGATCCTGCGCGGCCTCAAGGAGCGCTACGCCGTGCACCACGGTGTGGAGATCACCGACCCGGCCATCGTCGCGGCGG CCACCCTGTCCCACCGCTACATCGCCGACCGTCAGCTGCCGGACAAGGCCATCGACCTGATGGACGAGGCCGCCAGCCGT ATCCGCATGGAGATCGATTCCAAGCCGGAGGAACTGGACCGCATGGAGCGCCGCCTGATCCAGCTCAAGACCCAGCGCGA GATGCTGAAGAAGGAGAAGGACGCCGAATCGGCCAAGCGCCTGGCCGACCTGGAAGCGGACATCGACACCTTGGAACGCG AGTTCTCCGACCTCAACGAAGTCTGGAAATCGGAAAAGGCCGCGCTGCAGGGCGCCACCCGGATCAAGGAGCAGATCGAG GCGGCCAGGGTGGAACTGGAAGGCGCCCAGCGCCGCCAGGACTATGCGCGCATGAGCGAGATCCAGTACGGGGTGCTGCC GCAGCTGGAGAAGCAGCTGGCCGAAGCCCAGGCGGCCGAGCAGCAGGAGTTCAAGCTGGTCCAGGACCGGGTCACTGCCG AGGAGATCGCCGAGGTGGTTTCGCGCTGGACCGGCATCCCGGTGTCCAAGATGCTCGAGGGCGAGCGCGAGAAGCTGCTC AAGATGGAAGACCAGCTGCGCGAGCGCGTGGTCGGCCAGGAGGAGGCGATCAAGGTCGTGTCCGATTCGGTGCGTCGCTC GCGTGCCGGCCTGTCCGATCCAAACCGGCCCAGCGGTTCGTTCCTGTTCCTGGGCCCGACCGGCGTGGGCAAGACCGAGC TGTGCAAGGCGCTGGCCGAATTCCTGTTCGACAGCAGCGAGGCGATGATCCGCATCGACATGAGCGAGTTCATGGAGAAG CATTCGGTCGCCCGGCTGATCGGCGCGCCCCCGGGCTACGTGGGTTATGAGGAAGGCGGTTACCTGACCGAGGCGGTGCG TCGTCGCCCGTACTCGCTGATCCTGCTGGACGAGGTGGAAAAGGCGCACGGCGATGTGTTCAACATCCTGCTGCAGGTGC TCGACGATGGCCGCCTGACCGATGGCCAGGGCCGCACCGTGGACTTCCGCAACACCGTGATCGTGATGACCTCCAACCTG GGCAGCCAGCTGATCCAGGAGATGTCGCACGATGAAAGCGCCGAGTCCTACACCAAGATCAAGGCGGCGGTCATGGGCGT GGTCCAGGCGCACTTCCGGCCCGAGTTCATCAACCGGCTCGATGACATCGTGGTGTTCCATCCGCTGGACAAGGTCCAGA TCCGCCAGATCGCCAGGATCCAGCTGCGCGGGCTGGAAGCGCGCCTGCGTGATCGCGGGATCGGGCTGGAGGTGTCCGAT GCGGCGCTGAGCATCCTGGGCGATATCGGGTTCGACCCGGTCTACGGCGCACGTCCACTCAAGCGCGCGATCCAGTCGCA GCTGGAAAACCCGCTGGCGCAGAAGATCCTGTCCGGCGCGTTCGTCAGCGGCGACACCGTGCAGGTCGACGCGGCAGGGG GGCGGCTGGTGTTCGCCAAGGCGTAA Protein sequence : MRMDKLTSRFQQALADAQSLAVGRDHNFIEPVHLMVALLDQSGGSTRALLQQAGVNVPVLRERLGESLEALPKVTGQAGN LSVGNDLGRLLNQTDKLAQQHGDAFIASEWFVLAAVEDNGPLGLALRTAGADKKKVEAAIDKIRGGESVQSENAEDQRQA LEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPENLKNKRVLSL DMGALIAGAKFRGEFEERLKGVLNDLAKSEGQIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYR KYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRYIADRQLPDKAIDLMDEAASR IRMEIDSKPEELDRMERRLIQLKTQREMLKKEKDAESAKRLADLEADIDTLEREFSDLNEVWKSEKAALQGATRIKEQIE AARVELEGAQRRQDYARMSEIQYGVLPQLEKQLAEAQAAEQQEFKLVQDRVTAEEIAEVVSRWTGIPVSKMLEGEREKLL KMEDQLRERVVGQEEAIKVVSDSVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSSEAMIRIDMSEFMEK HSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHGDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL GSQLIQEMSHDESAESYTKIKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKVQIRQIARIQLRGLEARLRDRGIGLEVSD AALSILGDIGFDPVYGARPLKRAIQSQLENPLAQKILSGAFVSGDTVQVDAAGGRLVFAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-109 | 42 |
