Gene Information

Name : DSC_04930 (DSC_04930)
Accession : YP_004929680.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 854631 - 855653 bp
Length : 1023 bp
Strand : +
Note : COG0463 Glycosyltransferases involved in cell wall biogenesis

DNA sequence :
ATGGCCCAAGACCGCCTGACCGTGGTGATCGCCGCGCGCAACGAGGAGCAAGCCCTGCCGCGGTTGCACCAGCGCCTGCG
CGCGGTGCTGGACCGGCTCGATGCCGTCTCCACCCGGGTGCTGTACATCGACGACGGCAGCACCGACCGCACCTGGGAGG
CCATGCAGGCACTGGCCTCCCGCGACGCGCAGGTGGAATTGCTGCGGCTGTCGCGCAACTTCGGCAAGGAGGCGGCGCTG
ACCGCCGGCCTGGACCTGGTCGCCGAGGACAGCGCGGTGATGATCCTGGATGCCGATGGCCAGGACCCGCCGGAGCTGAT
CCCGCAGTTCGTCTCGGCCTGGCGCGAAGGGCATGACAACGTCTTTGGCACGCGGGTCGAACGCGATGGCGAAGGCTGGC
TCAAGCGCTTCACCGCGCACGGTTTCTACCGCCTGATCGGGCGCCTGTCCAAGACCCCGATACCGGCCGACACCGGCGAT
TTCCGCCTGCTGTCGCCGCGTGCGCACCTGGCCCTGAGGCAACTGCGCGAGCGCCATCGTTTCATGAAGGGCCTGTTCGG
CTGGGTCGGCTATGGGCCGCTGTCCATTCCCTACCATCGCCAGGCGCGCATCGCCGGGCGCAGCAAGTTTGGCGCGTGGA
AGCTGTGGAACTTCGCCCTGGAAGGCATCACCAGCTTCTCCACCGCGCCGCTGCGCGCGGCCACCTACCTGGGTCTGATC
GTGGCGGTGCTGTCCTTCGTCTACGCGGTGATCGTCATCGCGCGCGCGCTGGCCCATGGCGACCCGGTCGCCGGCTGGCC
CAGCATGATGACCGTGGTGCTGTTCCTGGGCGGCACCCAGCTGATCGCGCTGGGCCTGATCGGGGAATACCTGGGCCGGC
TCTACGAGGAAGCCAAGCAGCGGCCGCTGTACCTGGTCCAGCAGTGGCAGCCGGCGCGCGAAGGCGTATCCTTCGAGCCA
ACCGAAGCAGACGGAGCGCGCCATGCGCACAGTCAGGCAGTTGCTGGCGGGCAAGACCGCTGA

Protein sequence :
MAQDRLTVVIAARNEEQALPRLHQRLRAVLDRLDAVSTRVLYIDDGSTDRTWEAMQALASRDAQVELLRLSRNFGKEAAL
TAGLDLVAEDSAVMILDADGQDPPELIPQFVSAWREGHDNVFGTRVERDGEGWLKRFTAHGFYRLIGRLSKTPIPADTGD
FRLLSPRAHLALRQLRERHRFMKGLFGWVGYGPLSIPYHRQARIAGRSKFGAWKLWNFALEGITSFSTAPLRAATYLGLI
VAVLSFVYAVIVIARALAHGDPVAGWPSMMTVVLFLGGTQLIALGLIGEYLGRLYEEAKQRPLYLVQQWQPAREGVSFEP
TEADGARHAHSQAVAGGQDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 1e-59 46
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 4e-61 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSC_04930 YP_004929680.1 family 2 glycosyl transferase VFG0670 Protein 2e-60 46