Gene Information

Name : DSC_04255 (DSC_04255)
Accession : YP_004929545.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 712684 - 713082 bp
Length : 399 bp
Strand : -
Note : COG0629 Single-stranded DNA-binding protein

DNA sequence :
ATGAGCACGCATTTCGTCGGCGAAGGCAACATCGGTTCTGCGCCGGATTTCCGGGAGTTCCCCCACGGCAACGAGGAGCC
GCGCAGGCTGCTGCGCCTGAACGTCTACTTCGACAACCCCGTCCCGACCAAGGACGGCTACGAGGACCGCGGCGGCTATT
GGGCGCCGGTCGAACTGTGGCATCGCGATGCCGAGCATTGGCAGACCCTGTATCAGAAGGGGATGCGGGTGCTGGTCGAG
GGCCGCACGGTCAAGGACGAGTGGGAAGATGCCGAGGAGAACGAGCGCACCACGTTCAAGATCGAAGCGCGCCGCGTCGG
CATCCTGCCGTTCCGCGTGGAGTCCGTGAAGCTCAGCGCCAAGCCGGCCAGCACCGATCCGGACCCGGACGCCACGTGA

Protein sequence :
MSTHFVGEGNIGSAPDFREFPHGNEEPRRLLRLNVYFDNPVPTKDGYEDRGGYWAPVELWHRDAEHWQTLYQKGMRVLVE
GRTVKDEWEDAEENERTTFKIEARRVGILPFRVESVKLSAKPASTDPDPDAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 3e-52 84
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 8e-45 69
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 2e-33 56
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 1e-25 55
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 3e-26 50