Gene Information

Name : DSC_04095 (DSC_04095)
Accession : YP_004929513.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 685467 - 686363 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
ATGAACCGTCTTCTCGCCACGCTCGGCGCCGCGTTGCTGCTGGCGCTGTCCGTCCCCGTCCATGCCGTCGAGATCCTGCG
CTGGGAGCGACTGCCCCTGGCGCTGCCGCTCGTCGTCGGCGAGGAGCGGGTCATCTTCATCGACCGCAACGTGCGCGTCG
GCGTCCCCGCGTCGGTGGGCGCTCGACTGCGCGTGCAGAGCGCGGCCGGCGCCGTTTACCTGCGCGCCAGCGAGCCGATC
GAACCGACGCGGCTGCAACTCCAGGATGCCGGCAGCGGCACGGTGATCCTGCTGGACATTGCCGCCGAAGCGCCGCAGGA
AGGACAGCCGCCGCTGGAGCCGGTGCGCATCGTCATCGCGGCGCCGGCCGGCGGCCAGGGCGTCGCGGCCGAGGACGATC
CACAGGCACGCGCCGCGCGCACCGACCGTCCGGCACCGCCGACGCCCGTGCCGGTGGTGCTGACGCGCTACGCCGCGCAA
AGCCTCTACGCGCCGCTGCGCACGGTCGAGCCGGTGCCGGGCATTACCCGCGCCAACGTGCGCCGGGACCTGCCGCTGCA
CTCGCTGCTGCCGACGCTGCCCATCCAGGCGCAGGCACTGGCTGCCTGGCGCCTGGGCGACCTGTGGGTCAGCGCCGTGC
GCCTGCGCAACACCGCGCCGCGCGGGTTCGATCTGGATCCGCGCGCGCTGCAAGGCGACTTCCTGACCGCGACGTTCCAG
CACCCCGACCTCGGGCCGGCCGGCACGCCGGAAGACACAACCGTCGTCTACCTCGTCACCCGCGGCCGCGGCTTGCCGCA
GTCGCTGCTGCCCGCGATCGCACCCGTCGACGCCTCCCTCAACCTGCCGGCGCCCGCCGCGCCGAGCGACCGCGACGGAG
GCCGCGATGAAGAGTAA

Protein sequence :
MNRLLATLGAALLLALSVPVHAVEILRWERLPLALPLVVGEERVIFIDRNVRVGVPASVGARLRVQSAAGAVYLRASEPI
EPTRLQLQDAGSGTVILLDIAAEAPQEGQPPLEPVRIVIAAPAGGQGVAAEDDPQARAARTDRPAPPTPVPVVLTRYAAQ
SLYAPLRTVEPVPGITRANVRRDLPLHSLLPTLPIQAQALAAWRLGDLWVSAVRLRNTAPRGFDLDPRALQGDFLTATFQ
HPDLGPAGTPEDTTVVYLVTRGRGLPQSLLPAIAPVDASLNLPAPAAPSDRDGGRDEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-73 68
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-72 63
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-62 54
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 4e-62 54
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-62 54
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 4e-60 52
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 2e-47 49
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 2e-45 49
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 2e-45 49
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 6e-47 49
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 3e-47 48
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 4e-46 46
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 5e-43 44