Gene Information

Name : DSC_04060 (DSC_04060)
Accession : YP_004929506.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 677651 - 678091 bp
Length : 441 bp
Strand : -
Note : COG1020 Non-ribosomal peptide synthetase modules and related proteins

DNA sequence :
ATGCCCACTTCGTCCCTTCATTCGCCGGCGTGGCGGCGCGGCCTGATGGCCGTCGCGCTGCTCGCCGCGCTGGCCGGCGC
AGCGGCCCACGCGAACGACGATCTGATCGTCGTGACCGACAGCCGCCATCCCGTCCAGGCGCCGGCCGGCGCGCGCGTTA
TCCTGCTGGACCAAGCCGCGCGCATCGAGGCCGAGTTGGCCGCCGACCTGCCGAGCGATCCCGCCCGCGGCGCCGCGCTC
GTCCGGCAGCGCCTCAAGGACGGCGGCGCCCCGCTGCAGACGCGCCTCGCCACCGCCTATCAGGGTGTGGTCGACGCCTG
GAGCCTCGGCGTCACCACCATCCCCGCCGTGGTCGTGGACCAGCGCTACGTGGTCTACGGCGAACCCGACGTGGCCAAGG
CCGTCGCCCGCATCGACGCCCACCGCAGGAGCCGGCCATGA

Protein sequence :
MPTSSLHSPAWRRGLMAVALLAALAGAAAHANDDLIVVTDSRHPVQAPAGARVILLDQAARIEAELAADLPSDPARGAAL
VRQRLKDGGAPLQTRLATAYQGVVDAWSLGVTTIPAVVVDQRYVVYGEPDVAKAVARIDAHRRSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG52 AAN62274.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-37 75
ORF C44 AAN62137.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-32 71
EXA21 ABD94630.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-20 51
RL018 AAP84145.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-20 51
unnamed ABR13358.1 hypothetical protein Not tested PAGI-5 Protein 4e-20 50