|
Name : DSC_03965 (DSC_03965) Accession : YP_004929487.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 660456 - 661760 bp Length : 1305 bp Strand : - Note : COG1055 Na+/H+ antiporter NhaD and related arsenite permeases DNA sequence : ATGCTTGCCCTTGCGATTTTCATCGTCACTCTTGTATTCGTCATTTGGCAGCCGCGAGGGTTCGGTATCGGTTGGTCGGC ACTGGCCGGCGCCGCAGTAGCGTTGGCCACCGGCGTCGTCGGGTGGGGTGACGTCGCCACGGTGTGGGGGATTGTCTGGG ATGCGACGTTTACTTTCGTCGCACTCATCATCATCTCGCTCATCCTAGACGCGGCCGGCTTCTTCGCATGGGCGGCGCTG CACGTGGCGCGCTGGGGCGGCGGCAGTGGTCGGAAACTCTTTCCGCTGATCGTCTTGCTTGGCGCTGCGATCGCGGCAGT GTTCGCCAACGATGGCGCGGCTCTCCTGTTGACGCCGATTGTTCTTGCCATTCTGTTGCGCTTGAACTTTCCACCCGCGA GTGCGCTCGCGTTTACTGTGGCCTGCGGTTTCATCGCTGATACGGCCAGCCTGCCGCTGGTTGTCTCGAACTTGGTCAAC ATCGTCACCGCGAACTTTTTTGACGTCTCGTTCGGGCGCTACGCAGCGGTCATGGTGCCGGTGAATCTGGTGTCGGTCGG CGCCACGCTGATCGTCCTGTGGCTCTGGTTCCGCCGCGACATTCCCCGCACCTACCCGGTCCACGATCTTGAAGCGCCGC ATGAGGCGATCCGCGACAAGGCGGTCTTCCGCGCCGCCTTGCCCCTGCTCGCATCACTGCTCCTTGCCTACTTCGTGACC GGGCCGCTGGGCGTCCCGATCGCCTTGGTGACGGGTGTGGCTGCGCTGGTGCTGATGGCAATTGCAGGTCGCTGGGCGAC AGGCGGCCGAGGCGCCACCATGGCCGTGACCAAGATTCTGCGTGGCGCGCCCTGGCAGATCGTGCTGTTCTCGGTTGGCA TGTATCTGGTGGTTTATGGGCTTGGCAACGCCTGGCTGACAAAGGCTGCAAGTGCGGTGCTTGAGTGGCTGGCGGCGCAG GGAACCTTTGTGGCCACGATCGGCACCGGCTTCGCAGTGGCGGGCCTCGCTTCGATCATGAACAACATGCCGGCGACGCT GGTGGGCGCACTGGCCATCGACGGGGCCAATCTTCCGGCCGCCACCCGCGAATTGATGATCTATGCCAACGTCGTGGGCA ACGACCTTGGCCCCAAGCTCACTCCGATTGGGTCGCTCGCGACCCTGCTGTGGCTGCACGTCCTCGCCGGCAAGGGCCAA CGGATCACGTGGGGACAGTACATGAAGGTAGGGCTAATCCTCACGCCCCCGGTCCTGTTGGCCACGCTCGTCGCCCTCTG GATTTGGCTGCCGCTCGCTCAATGA Protein sequence : MLALAIFIVTLVFVIWQPRGFGIGWSALAGAAVALATGVVGWGDVATVWGIVWDATFTFVALIIISLILDAAGFFAWAAL HVARWGGGSGRKLFPLIVLLGAAIAAVFANDGAALLLTPIVLAILLRLNFPPASALAFTVACGFIADTASLPLVVSNLVN IVTANFFDVSFGRYAAVMVPVNLVSVGATLIVLWLWFRRDIPRTYPVHDLEAPHEAIRDKAVFRAALPLLASLLLAYFVT GPLGVPIALVTGVAALVLMAIAGRWATGGRGATMAVTKILRGAPWQIVLFSVGMYLVVYGLGNAWLTKAASAVLEWLAAQ GTFVATIGTGFAVAGLASIMNNMPATLVGALAIDGANLPAATRELMIYANVVGNDLGPKLTPIGSLATLLWLHVLAGKGQ RITWGQYMKVGLILTPPVLLATLVALWIWLPLAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 9e-87 | 59 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 5e-74 | 51 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-78 | 51 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 1e-72 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DSC_03965 | YP_004929487.1 | arsenical pump membrane protein | BAC0578 | Protein | 3e-87 | 60 |
| DSC_03965 | YP_004929487.1 | arsenical pump membrane protein | BAC0576 | Protein | 8e-87 | 60 |
| DSC_03965 | YP_004929487.1 | arsenical pump membrane protein | BAC0577 | Protein | 2e-86 | 59 |
| DSC_03965 | YP_004929487.1 | arsenical pump membrane protein | BAC0031 | Protein | 1e-84 | 59 |
| DSC_03965 | YP_004929487.1 | arsenical pump membrane protein | BAC0575 | Protein | 1e-76 | 50 |
| DSC_03965 | YP_004929487.1 | arsenical pump membrane protein | BAC0574 | Protein | 1e-72 | 50 |
