Gene Information

Name : hemC (DSC_03485)
Accession : YP_004929391.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 553872 - 554792 bp
Length : 921 bp
Strand : +
Note : COG0181 Porphobilinogen deaminase

DNA sequence :
ATGAGATCGCTGCGCATCGCCACCCGAAAGAGCGCGCTTGCCCTGTGGCAGAGCGAACACACTGCCCGGCTGCTGCGCCA
GGCGCATCCGGGCCTTGCGGTGGAGCTGGTGCCGCTGAGCACCCGGGGCGACGAGGTGCTGGACCGCTCGCTGGCCGCGA
TCGGCGGCAAGGGCCTGTTCCTGAAGGAGCTGGAACTGGCGATGCTGGACGATCGCGCCGATTGCGCGGTGCATTCGCTC
AAGGACGTGCCCATGGAGCTGGATGGACCGTTCGTGCTGCCGGCGATCCTGGCGCGTGCCGATCCGGCCGACGCCTTCGT
CTGCAACGCCTACCCGCGGCTGGAGGCGCTGCCGCATGGCGCGCGCGTGGGCACCTCCTCGCTGCGTCGGCAGTCGCAGC
TGCGCGCGCTGCGCCCGGACCTGCAGCTGGCGGACCTGCGCGGCAACGTCAACACCCGCCTGGCCAGGCTGGACGCCGGC
AGCTATGACGCCATCATCCTGGCCTGCGCCGGGCTGCAGCGGTTGGGCCTGCAGGAGCGCATCACCGCCCGCCTGGCCGC
GCCCGAGTGGCTGCCGGCGCCGGCGCAGGGCGCCATCGCGGTGGAATGCCGCAGCGATGCGCCGCAGGTGCTGGCCCTGT
TCGCCGTGCTGGACCACCTGCCGACCCGGCGCTGCGTGGAGGCCGAGCGCGCCATGAACCGCGCCCTGCACGGCAGCTGC
CATGTGCCGGTCGGCGCGTTCGCCCGGGAAGACGCCCACGGCATGTCCCTGAGTGGATTGGTCGGTTCGGCCGAACTGGG
CACGCTGGTCCGCGCCGAAGCGGCCTCGGCCGACCTCACCCCGGAAAACCTGGGCCACCAGGTCGCCCAGGCGCTGCTGG
CCAATGGCGCCGACGCGCTGCTGGCTGATCTGGATCTGTAG

Protein sequence :
MRSLRIATRKSALALWQSEHTARLLRQAHPGLAVELVPLSTRGDEVLDRSLAAIGGKGLFLKELELAMLDDRADCAVHSL
KDVPMELDGPFVLPAILARADPADAFVCNAYPRLEALPHGARVGTSSLRRQSQLRALRPDLQLADLRGNVNTRLARLDAG
SYDAIILACAGLQRLGLQERITARLAAPEWLPAPAQGAIAVECRSDAPQVLALFAVLDHLPTRRCVEAERAMNRALHGSC
HVPVGAFAREDAHGMSLSGLVGSAELGTLVRAEAASADLTPENLGHQVAQALLANGADALLADLDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-56 54
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-56 54