Gene Information

Name : DSC_03480 (DSC_03480)
Accession : YP_004929390.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Virulence
Product : putative two-component system response regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 552969 - 553706 bp
Length : 738 bp
Strand : +
Note : COG3279 Response regulator of the LytR/AlgR family

DNA sequence :
ATGCCCCTGACCGTGGTGGTTGTAGACGACGAACCGCTCGCCCGCGAACGCCTGCGCAGCCTGCTGGCCGACCAGCCGGG
CGTGCAGGTGCTGGCCGAGGCCGGCGATGGCCTGGCCGCGCTGCAGGCCTGCGCCGAGCATCGCCCGGACCTGGTCCTGC
TGGACATCTCCATGCCCGGCGTGGATGGGCTGGAGGCCGCGCGCCACCTGGCCGCATTCGAGCCGCGCCCGGCGGTGGTG
TTCTGCACCGCCTACGATGCCCATGCGCTGTCGGCGTTCGAGGCGGCGGCGATCGACTACCTGATGAAGCCGGTGCGCGC
CGAACGCCTGGCTTCGGCGCTGGAGCGCGCGCGCACCTTCATCGCCGGGCGTGCCACCGCGCCGGCGCCGGCCTCAAGCA
GCCAGCCGCGCACCCACCTGTGCGCGCGCCTGCGTGGCAGCCTGCGGCTGATCCCGCTGGACGATGTGCATTACCTGCAG
GCCGAGGAAAAGTACGTCGTGGTCCACCACGCTCGTGGCGAGGATCTGATCGAGGAATCGCTCAGGTCGCTGGAAGAGGA
GTTCGCCAGCCGCTTCGTGCGCATCCACCGCAACTGCCTGGTTGCCCGCCACGAGCTGATGGAACTGCGCCGGGTCGAGG
ACGGCCGGGTGCAGGCCGTGCTGCGCCATGCTGCGGCGCCGCTGGAGGTCAGCCGGCGCTGCGTGCCGGCCCTGCGCGAG
ACGGTCAAGGCGCTGTAA

Protein sequence :
MPLTVVVVDDEPLARERLRSLLADQPGVQVLAEAGDGLAALQACAEHRPDLVLLDISMPGVDGLEAARHLAAFEPRPAVV
FCTAYDAHALSAFEAAAIDYLMKPVRAERLASALERARTFIAGRATAPAPASSSQPRTHLCARLRGSLRLIPLDDVHYLQ
AEEKYVVVHHARGEDLIEESLRSLEEEFASRFVRIHRNCLVARHELMELRRVEDGRVQAVLRHAAAPLEVSRRCVPALRE
TVKAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 1e-30 41
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSC_03480 YP_004929390.1 putative two-component system response regulator VFG0119 Protein 1e-31 47