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Name : DSC_02680 (DSC_02680) Accession : YP_004929230.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 370559 - 372304 bp Length : 1746 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : TTGGGTTTCCACGTGAACGCGGTGTCCTCATCGATCGATCGTCCGGCGCCGGAGCGCGCCGACGAACGCGTGGTCGCGGC CCTGCTGGCCAAGGGCCGGCTCAAGGACGTGGATCTGGTGCGCGCCCGGCGGCTGCAGGAGGAAACCGGCGGCAGCGTGC TGGCCCTGCTGCTGCGCCTTGGGCTGGTGTCCGAACGTGACCATGCCGAGACCAGCGCCGAGGTGCTGGGGCTGACCCTG CTGGCGGCCAGGCAGTTGGCCGACGTTGCCCCGGAACTGCCCGAGGACGTGGCGCTGTCGTTGCGCTTCCTCAAGCAGTT CCATGTCTGCCCACTGGGCGATGCCGACGGTGCGCTGAACCTGTGGGTCGCCGATCCCTGCGATGGCTATGCGGTCGATG CGGTGCGCATGGCGATCGGCCGCCCGGTGCGGGCGATGGTCGGGCTGCGCTCGGAAATCGACGACACCATCGAGCGCTGG CATGGACAGGGCCGCAGTGCGATGGGCGCGATCGTGGAGAACGCCGACGGTGACAGCAGCGGTGACCTGGACGATGTCGA ACACCTGCGCGACCTGGCCTCCGAAGCGCCGGTGATCCGGCTGGTCAACCTGGTGATCCAGCGCGCGGTGGAACTGCGCG CCTCGGACATCCACATCGAGCCGTTCGAAAGCCGCCTGAAGGTACGTTATCGGGTCGACGGCGTGCTGGAGGAAGGCGAA AGCCCGCCGGCCAACCTCACCGCCGCGGTGATCAGCCGCGTCAAGATCATGGCCCGGTTGAACATCGCCGAGCGGCGGCT GCCGCAGGACGGGCGCATCCAGCTGCGGGTGCAGGGCAAGGAGCTGGACCTGCGCGTGAGCACGGTGCCCACCGCCCATG GCGAGAGCGTGGTGATGCGCCTGCTGGACCGCGAGACGGTGGTGTTCGACTTCCAGCGGCTGGGCTTCACCGATGAGTTC CTGCCGCAGTTCCTGCACGTGCTGCAGCAGCCGCACGGCATCCTGCTGGTGACCGGGCCGACCGGCTCGGGCAAGACCAC CACGCTGTACACCGCGCTGAGCCAGCTCAACACGTCCGACGTCAAGATCATCACCGTCGAGGATCCGGTCGAATACCAGA TCGAAGGGCTCAACCAGATCCATGTGAAGCCGCAGATCGGCCTGGATTTTGCCAGCGCGCTGCGCAGCATCGTGCGCCAG GATCCGGACATCATCATGATCGGCGAAATGCGCGACCTGGAGACCGCGCGCATCGCCATCCAGTCCGCGCTCACCGGCCA CCTGGTGCTGTCCACGCTGCATACCAACAACGCCGCCGGCGGCATCACCCGGCTGCTGGACATGGGTGTGGAGGACTACC TGCTGACCTCCACCATCAACGGCATCCTGGCCCAGCGCCTGGTGCGCCGGCTGGAGCCCACCCACGCCGAACGCTATCCG GCCACGCCGGAGGAAATCGCCAGGTTCGAGCTGCGCCGGTTCCAGCCCGAAGGCCAGATCACGCTGTATCGCCCGCGCGC TTCGGCGCTGGCCCCAACCGGCTACCTGGGCCGCACCACCATCACCGAGTTCCTGGTGATGGACGACGAGCTGCGCCGGG CGATCATGCGCCACGCCGGCATGGGCCAGATCGAGGCGCTGGCCCGCAAGGCCGGCATGCGCACCATGTACGAGGACGGC ATCGCCAAGGCCCTGGCCGGCATGACCACCATCGAGGAAGTGCTGCGGGTGACGGAGGATGGGTGA Protein sequence : MGFHVNAVSSSIDRPAPERADERVVAALLAKGRLKDVDLVRARRLQEETGGSVLALLLRLGLVSERDHAETSAEVLGLTL LAARQLADVAPELPEDVALSLRFLKQFHVCPLGDADGALNLWVADPCDGYAVDAVRMAIGRPVRAMVGLRSEIDDTIERW HGQGRSAMGAIVENADGDSSGDLDDVEHLRDLASEAPVIRLVNLVIQRAVELRASDIHIEPFESRLKVRYRVDGVLEEGE SPPANLTAAVISRVKIMARLNIAERRLPQDGRIQLRVQGKELDLRVSTVPTAHGESVVMRLLDRETVVFDFQRLGFTDEF LPQFLHVLQQPHGILLVTGPTGSGKTTTLYTALSQLNTSDVKIITVEDPVEYQIEGLNQIHVKPQIGLDFASALRSIVRQ DPDIIMIGEMRDLETARIAIQSALTGHLVLSTLHTNNAAGGITRLLDMGVEDYLLTSTINGILAQRLVRRLEPTHAERYP ATPEEIARFELRRFQPEGQITLYRPRASALAPTGYLGRTTITEFLVMDDELRRAIMRHAGMGQIEALARKAGMRTMYEDG IAKALAGMTTIEEVLRVTEDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-89 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-89 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DSC_02680 | YP_004929230.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-90 | 48 |
| DSC_02680 | YP_004929230.1 | general secretory pathway protein E | VFG1876 | Protein | 8e-86 | 43 |
