Gene Information

Name : DSC_02540 (DSC_02540)
Accession : YP_004929202.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Virulence
Product : UDP-glucose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 336651 - 337817 bp
Length : 1167 bp
Strand : +
Note : COG1004 Predicted UDP-glucose 6-dehydrogenase

DNA sequence :
ATGAAGATTGCAGTGGCCGGTACCGGGTACGTCGGCCTGTCCAATGGCGTCCTGTTGGCCAGGCACCATCAGGTGGTGGC
CCTGGATATCGTCGAGGCCAAGGTCAGGATGCTCAACGAAGGCCGTTCGCCGATCGTCGATGAGGAACTGGAGGCCGCGC
TGGCCGAAGGGGGGCTCGATTTCCGCGCCACGCTCGATCCGCTCGATGCCTACACCGGCGCCGAGTTCGTGATCATCGCC
ACCCCGACCGACTACGATCCGGAAACCAACTACTTCAATACCCGCTCGATCGAGACGGTGATCGCCAAGGTGCTGGAAAT
CAATCCGGCCGCGACCATGGTGATCAAGTCCACCGTGCCGGTGGGCTATACCGAAAAGGCGCGCGCCCAGTTCGGCACCG
ACAACATCCTGTTCTCGCCGGAGTTCCTGCGCGAGGGCCGGGCCCTGTACGACAACCTGCATCCGTCGCGCATCATCGTC
GGCGAGCGCTCCCCGCGCGCGGAAAAGTTCGCCGCGCTGCTGCAGGAAGGGGCGATCAAGAAGAACGTGCCGGTGCTGTT
CACCGAGCCAACCGAGGCCGAGGCGATCAAGCTGTTCGCCAACACCTACCTGGCCATGCGCGTGTCCTACTTCAACGAGC
TCGATACCTACGCGGTGACCAATGGCCTGGACAGTCGCCAGATCATCGAAGGCATCTGCCTGGATCCGCGCATCGGCGCG
CACTACAACAATCCCTCGTTCGGCTATGGCGGCTACTGCCTGCCCAAGGACACCAAGCAGCTGTTGGCCAACTACCAGGC
GGTGCCGCAGAACCTGATCCGCGCGATCGTCGATTCCAACACCACCCGCAAGGACTTCATCGCCGCCGACGTGCTGCGGC
GCAACCCCAAGGTGGTGGGCATCTACCGGTTGATCATGAAGGCCGGCTCGGACAACTTCCGCGCCTCCAGCATCCAGGGC
GTGATGAAGCGGCTCAAGGCCAAGGGCGTGGAGGTGATCGTCTACGAGCCGGCCTTGAACGAGCCCGAGTTCTTCCGCTC
GCGCGTGGTCAACGACCTGGACGCGTTCAAGCGCGAATCGGACGTGATCCTCAGCAACCGCAGGTCCAGCGCGCTGGATG
ACGTGGCCGACAAGGTCTACACCCGCGACCTGTTCGGCGACAACTAA

Protein sequence :
MKIAVAGTGYVGLSNGVLLARHHQVVALDIVEAKVRMLNEGRSPIVDEELEAALAEGGLDFRATLDPLDAYTGAEFVIIA
TPTDYDPETNYFNTRSIETVIAKVLEINPAATMVIKSTVPVGYTEKARAQFGTDNILFSPEFLREGRALYDNLHPSRIIV
GERSPRAEKFAALLQEGAIKKNVPVLFTEPTEAEAIKLFANTYLAMRVSYFNELDTYAVTNGLDSRQIIEGICLDPRIGA
HYNNPSFGYGGYCLPKDTKQLLANYQAVPQNLIRAIVDSNTTRKDFIAADVLRRNPKVVGIYRLIMKAGSDNFRASSIQG
VMKRLKAKGVEVIVYEPALNEPEFFRSRVVNDLDAFKRESDVILSNRRSSALDDVADKVYTRDLFGDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 5e-92 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSC_02540 YP_004929202.1 UDP-glucose dehydrogenase VFG0963 Protein 3e-98 58