Gene Information

Name : DSC_00285 (DSC_00285)
Accession : YP_004928751.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 3293092 - 3294240 bp
Length : 1149 bp
Strand : -
Note : COG1820 N-acetylglucosamine-6-phosphate deacetylase

DNA sequence : 
ATGAGCCGCTTTGCCCTGGTCAACGCGCGGGTGCTGGCCGAGGCGGGCATCGTCGATGGCGGCGCGCTGGTGATCGAGGA
CGGCCGCATCATTGCCCTGACCGACGCCGCTGGCGCGCGCGCCCGGACCGACGACCTGCGCGACCTGGGCGGGGCGTGGC
TGGCGCCGGGTTTCATCGACCTGCAGGTCAACGGAGGCGGCGGGGTGCTGTTCAACAACACGCCCACCGCCGCGGGCATC
GCCGCCATCGGGCGCGCGCATCGCAGGTTCGGCACCACCGCATTCCTGCCCACGCTGATCAGCGATGGCGCCGACACCAT
GCGCCGGGCGATCGCCGCCACCGGCCAGGCCATCGCCAATGGCGTGGACGGGGTGCTGGGCATCCACCTGGAAGGCCCGT
ACCTGGCGCCGGCACGCAAGGGCACCCACGACGCGCGGCAGTTCCGCGCACCGGACGAGGATGAAATGGCCATGGCCACC
GCGCTGGACAATGGCATCACCTTGATGACCGTCGCACCGGAACGGCTGGGGCCCGAACGCATCGCCGCGCTGGTCGCGCG
CGGGGCGCTGGTGTTCGCCGGCCACACCGCCGGCAGCTACGAGCAGATCCGCGCCGGACTGGACGCGGGCCTGCGCGGGT
TCACCCATCTGTTCAACGCCATGTCGCCGCTGCAAGGGCGCAGCCCCGGCGCGGTCGGCGCGGCGCTGGAAGATGAAGCA
AGCTGGTGCGGGGTGATCGTCGATGGCGTGCACGTGCATCCGGGCGCGCTGCGCGTGGCGCTGGCGGCCAAGCGGCCGGG
CAAGCTGCTGCTGGTGACCGATGCGATGCCGATGGTCGGTGCCGACAGCCCCAGTTTCGAGCTTTACGGCGAAACCATCA
CCGCGGTCGACGGGGTGGTGCGCAACGCCGCCGGTGCGCTGGCCGGCTCGGCGCTGGACATGGCCAGCGCAGTGCGCAAC
AGCGTGCGGCTGCTCGGCCTGCCGCTGCAAGAAGCCGTGCGCATGGCCGCGCTGTATCCGGCCCAGTGCCTGGGCCTGGC
CCACGAGCGCGGCCGCATCGCCCCCGGCCTGCGTGCGGACCTGGTGGCACTGGACGATCGTCTGCAGGTCATCGAAACCT
GGATCGGCGGACGCAGCGCGACCGGCTAG

Protein sequence : 
MSRFALVNARVLAEAGIVDGGALVIEDGRIIALTDAAGARARTDDLRDLGGAWLAPGFIDLQVNGGGGVLFNNTPTAAGI
AAIGRAHRRFGTTAFLPTLISDGADTMRRAIAATGQAIANGVDGVLGIHLEGPYLAPARKGTHDARQFRAPDEDEMAMAT
ALDNGITLMTVAPERLGPERIAALVARGALVFAGHTAGSYEQIRAGLDAGLRGFTHLFNAMSPLQGRSPGAVGAALEDEA
SWCGVIVDGVHVHPGALRVALAAKRPGKLLLVTDAMPMVGADSPSFELYGETITAVDGVVRNAAGALAGSALDMASAVRN
SVRLLGLPLQEAVRMAALYPAQCLGLAHERGRIAPGLRADLVALDDRLQVIETWIGGRSATG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 3e-51 46
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 3e-51 46
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSC_00285 YP_004928751.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 1e-51 46