Gene Information

Name : DSC_10980 (DSC_10980)
Accession : YP_004930881.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Virulence
Product : type II secretion system protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2181596 - 2182084 bp
Length : 489 bp
Strand : +
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence : 
ATGCGCCTGCGATCCCGCGCCCTTGCCCCCAGCCCCCTGCACCTGCCCCGGGTCGCGCCCGCGTCCGGGATGCACCCCCA
GCGCGGCTTCACCTTGGTCGAACTGATGGTGGTGATCGTGATCATCGGCCTGCTGGCCACGGTGGTGGCGATCAACGTGC
TGCCCAGCCAGGACCGCGCCATGGTGGAAAAGGCCCGTGCCGATGTCGCCGTGCTCGAGCAGGCCATCGAAACCTACCGC
CTGGAGAACATGACCTATCCGCGCACCGAAGACGGGCTGAACGCGCTCATGGTCGCGCCGCGCGGCCTGCCGCGGCCGGA
ACGCTACCGCCAGGGCGGCTACATCCGCCGCCTGCCCACCGACCCGTGGGGCAATGCCTACCAGTACCGCTACCCCGGCA
GTCATGGTGCCTTCGATGTGTACTCGTTCGGCGCCGACGGCGTGGAAGGCGGCGAAGGTGACGGCGCCGACATCGGCAAT
TGGAGCTGA

Protein sequence : 
MRLRSRALAPSPLHLPRVAPASGMHPQRGFTLVELMVVIVIIGLLATVVAINVLPSQDRAMVEKARADVAVLEQAIETYR
LENMTYPRTEDGLNALMVAPRGLPRPERYRQGGYIRRLPTDPWGNAYQYRYPGSHGAFDVYSFGADGVEGGEGDGADIGN
WS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-28 56
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-29 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSC_10980 YP_004930881.1 type II secretion system protein G VFG2050 Protein 2e-29 56
DSC_10980 YP_004930881.1 type II secretion system protein G VFG0180 Protein 6e-28 50
DSC_10980 YP_004930881.1 type II secretion system protein G VFG1871 Protein 1e-23 44