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Name : DSC_10975 (DSC_10975) Accession : YP_004930880.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Virulence Product : type II secretion system protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 2180349 - 2181569 bp Length : 1221 bp Strand : + Note : COG1459 Type II secretory pathway, component PulF DNA sequence : ATGCCGACGTTTGACTACGCCGCCCTGGACCTGGACGGGCGCGTCAGCAGTGGCGTGCTCGACGCGCCCAGCGCGCGCGA CGCGCGGCGGCAGCTGGAGCAGCGCCGGCTGGTGCCGGTGCGCCTTCAGCCGGTCGCCGGCACCGGCGCCGGTGAGGCCA GCGGCAACACCCGTCCCGGACGCGGCCGCTTCAGCACCAAGGCGCTGACCCTGTTCACCCGCCAGCTGGCGACCCTGATC GTGGCAGTGCCACTGGAAGAGGCGCTGCGCACGATCGGCTCGCAGTCCGAGCACAGGCCGACCCGCGAAGTGGTGATGGC CACCCACGCACTGGTGCTGGAGGGCTTCCGCCTGTCCGATGCGATGACCCGGCAGGGCAATCGCTTCCCGGCGCTGTACC GGGCCATGGTGGCCGCCGGTGAAGGGTCTGGCGCCCTGCCGCAGATCCTCGAGCGCCTGGCCGACCTGCTGGAGCGCGAA CAGCAGGTACGTGGCAAGCTGCTGGCCGCGTTGGCCTATCCGGCCGCGCTGTCGCTGACCGCGGTGCTGGTGGTGATCGC GCTGATGGCCTTTGTGGTGCCGCGGGTGGTCGAGCAGTTCGAGTCGATGGGCCGGGAACTGCCGCTGCTGACCCGGGCGG TGATCGGCGTCTCCGATGGCATGGCAGCCTGGGGTCTGCCGGCTCTGCTGGTCATGGCAGTGGCGGCCGTGGTCTTTGCC CGGCTGCTGCGCCGCGACAGGGTCCGTCTGGCCGTCGATGCCCGCATCCTCGCCCTGCCCGTGCTTGGCCGCATCCTGCG TGATGTCCATGCCGCGCGCCTGGCCCGCACCCTGGCGATCATGCTCACCAATGGCCTACCGTTGATGGAAGGCCTGTCGA TCACCGCGCGCACCGTGCACAACCGGGTCCTGCGCGCGGCCACCGAGCGCATGGTGGCGGTGATCCGCGAAGGCGGCAGC CTGTCCAACGCAATGCGGCGCGCGGCCGTGTTCCCGCCCACCCTGCTGTACATGACCTCCAGCGGCGAGAACAGCGGGCG CCTGGCGCCGATGCTGGACCGCGCGGCGGACTACCTGGAACGCGAGTTTAACACGTTCACCAATGTGGTCATGAGCCTGC TGGAGCCGGTCATCATCGTCCTGCTGGGCGGGGTGGTGGCGGTAATCGTGCTGGCCATCCTGCTGCCCATCCTGCAGTTC AACACGCTGGCGATGGCGTGA Protein sequence : MPTFDYAALDLDGRVSSGVLDAPSARDARRQLEQRRLVPVRLQPVAGTGAGEASGNTRPGRGRFSTKALTLFTRQLATLI VAVPLEEALRTIGSQSEHRPTREVVMATHALVLEGFRLSDAMTRQGNRFPALYRAMVAAGEGSGALPQILERLADLLERE QQVRGKLLAALAYPAALSLTAVLVVIALMAFVVPRVVEQFESMGRELPLLTRAVIGVSDGMAAWGLPALLVMAVAAVVFA RLLRRDRVRLAVDARILALPVLGRILRDVHAARLARTLAIMLTNGLPLMEGLSITARTVHNRVLRAATERMVAVIREGGS LSNAMRRAAVFPPTLLYMTSSGENSGRLAPMLDRAADYLEREFNTFTNVVMSLLEPVIIVLLGGVVAVIVLAILLPILQF NTLAMA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-44 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DSC_10975 | YP_004930880.1 | type II secretion system protein F | VFG0181 | Protein | 3e-49 | 41 |
