Gene Information

Name : DSC_10640 (DSC_10640)
Accession : YP_004930813.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2104278 - 2104967 bp
Length : 690 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATCCTGCTGGTTGAAGACGACGTTTCGCTGGGCCAGGGCATCTGCATCGCGCTGCGGCGCGAGGCCTTCGCGGT
GGACTGGGTACGTGACGGGGCCAGTGCCCTGGCCGCGATCAACGATGGCGGGGTGGACCTGGTCCTGCTCGACCTGGGCC
TGCCGCGGGTGGACGGCATCGAGGTGATCCGCCAGGTCCGGGCCCAGGACAGCGATGTTCCCATCCTGGTCCTGAGCGCG
CGTGAGCGCGCCGCCGATCGCACCCTGGGCCTGGATGTCGGCGCCGACGACTACCTGGGCAAGCCGTTCGATACCGCCGA
GCTGCACGCCCGCATCCGGGCCCTGCTGCGGCGCAGCGCCGGCCGTGCCAAGCCGGCCCTTGACTCGGGCCCCCTGCACC
TGGATCCGGCCCGCCTGACGGTGACCTGGCAGGGCCGGGGCGTGGATCTGACCCGTCGCGAATTCGCCCTGCTGCGCCTG
CTCATGGAGCAACGCGGCCGCCCGCTGGGCCGCGAGACGATCCAGCAGCACCTGTATGGGTGGAACGAGGACGTGGCCAG
CAACGCGGTCGATGTGCATGTCCACCAGCTCCGCCGCAAGCTCCATCCTTCAGTGGTGCGCACCGTGCACGGGATCGGCT
ACGCCTTCGACCAGGACGCGGTGGCGCGTGCCGGCGAGACGCCTGCTTGA

Protein sequence : 
MRILLVEDDVSLGQGICIALRREAFAVDWVRDGASALAAINDGGVDLVLLDLGLPRVDGIEVIRQVRAQDSDVPILVLSA
RERAADRTLGLDVGADDYLGKPFDTAELHARIRALLRRSAGRAKPALDSGPLHLDPARLTVTWQGRGVDLTRREFALLRL
LMEQRGRPLGRETIQQHLYGWNEDVASNAVDVHVHQLRRKLHPSVVRTVHGIGYAFDQDAVARAGETPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSC_10640 YP_004930813.1 hypothetical protein AE015929.1.gene1106. Protein 3e-24 42
DSC_10640 YP_004930813.1 hypothetical protein AE000516.2.gene3505. Protein 4e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSC_10640 YP_004930813.1 hypothetical protein VFG0473 Protein 4e-34 44
DSC_10640 YP_004930813.1 hypothetical protein VFG1389 Protein 3e-24 42
DSC_10640 YP_004930813.1 hypothetical protein VFG1390 Protein 2e-29 41