Gene Information

Name : DSC_01935 (DSC_01935)
Accession : YP_004929081.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 210049 - 210792 bp
Length : 744 bp
Strand : +
Note : COG1125 ABC-type proline/glycine betaine transport systems, ATPase components

DNA sequence :
ATGCCGACCTTCTCCCTGCAACAGGTCACCCACCGCCACGGCCAAGCCATTGCCCTGGACCAGCTGGACCTGGACATCGC
CCGCGGCCGCACCACCGCCTTGATCGGGCCCAGCGGCGCCGGCAAGTCCAGCGTGCTGCGCCTGCTGCTGGGGCTGGAGT
GGCCCGAGCGCGGCCAGGTGCGGTTCGAAGGGGTGCCGCTGCAGCGGGCGACCCTGCTGCAACAGCGCCGCCGGATCGGC
TACGTGATCCAGGAAGGCGGGCTGTTCCCGCACTTGAGCGCGGGCGAGAACGCCGCGCTGCTGGCGCGCTCGCTGGACTG
GCCGCGCGCGCGCATCGGCGCACGCCTGGCCGAGCTGGCGCAGCTGTGCCAGCTGCCGATGGAGCTGCTGGCGCGCTTCC
CGGCCGAACTCTCCGGCGGCCAGCGCCAGCGGGTCGGCCTGATCCGCGCGCTGATGCTCGACCCACCGGTGCTGCTGCTG
GACGAACCGCTGGGCGCGCTGGACCCGGTCGTGCGTCACGACCTGCAGACCCAGATGCGCGAACTGTTCGGCCAGCTGCA
CAAGACCGTGGTGCTGGTCACCCACGATGTGGCCGAAGCGGCCTACCTGGCCGATACGCTGGTGCTGATGCGTGCCGGCC
GCGTGCTGCAGCAGGGCAGCGCGCGCGAGCTGCTGGAGCATCCGGTCGATGACTTCGTGACCCGCTTCCTCACCGCCCAG
CGCACCCTGGAAGAGGCGGCATGA

Protein sequence :
MPTFSLQQVTHRHGQAIALDQLDLDIARGRTTALIGPSGAGKSSVLRLLLGLEWPERGQVRFEGVPLQRATLLQQRRRIG
YVIQEGGLFPHLSAGENAALLARSLDWPRARIGARLAELAQLCQLPMELLARFPAELSGGQRQRVGLIRALMLDPPVLLL
DEPLGALDPVVRHDLQTQMRELFGQLHKTVVLVTHDVAEAAYLADTLVLMRAGRVLQQGSARELLEHPVDDFVTRFLTAQ
RTLEEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-32 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-33 43