Gene Information

Name : DSC_10155 (DSC_10155)
Accession : YP_004930716.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 1997338 - 1998279 bp
Length : 942 bp
Strand : +
Note : COG0583 Transcriptional regulator

DNA sequence :
ATGGAGCTTCGCCATCTGCGCTGCTTCCTAGCTGTCGCTGAAGAACTGCACTTCGCCCGCGCAGCAGAGAAGCTGCACAT
AGAGCAGTCGCCCTTGTCGCGCGCCATCAAGGAACTGGAAGAAGAACTGGGCGTGGTGCTGTTCGCGCGCACCACGCGCA
GCACTCGGCTGACCCGTGCGGGCAAGCTATTCTTTGAGCATGTGCCGCGTGTCTTCTCTGCCTTGCAGCAAGCGCGCGAC
AGCGTGAAGGCGGCCGCCAACGGTTTCCACAGCCAATTGCGCATTGCACTATCCGACGGTATGACGCCCTCGCGTCTGCC
GGCCTTGTTGGCACTGTGTCGGCAGGAAGAACCCGAGGTTGAAATCCGCTTCTTCGAGGTGCCGCTGTCGCAACAGATCA
AAGGGCTGCACGGCGACCTGTACGACGTGGGCTTTGCGCGCGCTGATGAGGTCGGTGATGGCCTCGTTGCCGAGCCGGTA
TGGAGTGATCCGCTGATGGTGGCCGTGCCGGCACGGCATCCCCTGCTGGCCCACAAGCGCATCCCCTTGGAAGAACTGCT
GCGCTATCCCCTGGTGCTGTGCGATCCGCAGGCGTGCGAGGGCCATGCCCGGCAAGTGGATCGTGTGCTGCGCCGTGTGG
ACATGGAACCGCTGGTGGCCGAACGGGTGGCGTCCTGCGACCTGATGATGGCGCTGGTGTCCGCAGGCATCGCCCTGGGG
CTGACGGGCTGCGCGCACATCTTGGCCAGCCAGGAACCTGGCGTAGTGGCACGGCCACTGACAGGCCGTTCACCGCTGCT
GACGACCTACTTGCTGCGTCCGGGAGGCGAGCCTTCGGAAATGCTCGCCCGCTTCATCGACCGTGTGCAGGCCATCGAAT
CACCCGAAGGTAGCAGGCCCACGCCGGGTCTTGATGCCGACTCCCTGGAGGAACCCGCATGA

Protein sequence :
MELRHLRCFLAVAEELHFARAAEKLHIEQSPLSRAIKELEEELGVVLFARTTRSTRLTRAGKLFFEHVPRVFSALQQARD
SVKAAANGFHSQLRIALSDGMTPSRLPALLALCRQEEPEVEIRFFEVPLSQQIKGLHGDLYDVGFARADEVGDGLVAEPV
WSDPLMVAVPARHPLLAHKRIPLEELLRYPLVLCDPQACEGHARQVDRVLRRVDMEPLVAERVASCDLMMALVSAGIALG
LTGCAHILASQEPGVVARPLTGRSPLLTTYLLRPGGEPSEMLARFIDRVQAIESPEGSRPTPGLDADSLEEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 4e-73 55
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 1e-49 42