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Name : lysS (DSC_09505) Accession : YP_004930590.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1874659 - 1876167 bp Length : 1509 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAATGAACCGCCGCCCATCGACGAAAACAGCCTCATCGCCGAGCGCCGCGGCAAACTTCACGCCCTGCGCGGGCAGGG CATCGCCTATCCGAACGACTTCCGTCGCCACGCGCTGGCCGGTGACCTGCAGGCCGAATTCGCCGATGCGGACACCTTCA CTGCCGGGGTGCTCGAAGGGCTGGACCGCCAGGTCAGGCTCGCCGGCCGGCTGATGGCCAAGCGGGTGATGGGCAAGGCC AGCTTCGCCCAGATCCAGGACCAATCCGGGCGCATCCAGCTGTTCCTGCAGGGCAATGTGCTGGGCGAGCGCTATGAGGC GTTCAAGGGCTGGGACGTGGGCGACATCGTCGGCGTCGAAGGCACCCTGACCCGCACCCGCACCGGCGAGCTGTCGGTCA AGGCCACCACGTTGCGCCTGCTGACCAAGTCGCTGCGTCCGCTGCCGGACAAGTGGCACGGCCTGAGCGATGTGGAACAG CGCTACCGCCAGCGCTACGTGGACCTGATCGTCACCCCGGAGGCGCGCGAAGTGTTCATCAAGCGCTCCAGGATCATCCG CGCGATCCGTGCCTGGCTGGACGCGCGCGGCTTCCTGGAAGTGGAAACGCCGATGATGCATTACATCCCCGGCGGGGCCA CGGCCAGGCCCTTCACCACCCATCACAACGCGCTGGGCCTGGACCTGTACCTGCGCGTGGCACCGGAGCTGTACCTCAAG CGCCTGGTCGTGGGCGGCCTGGAGCGCGTCTACGAGATCAACCGCAACTTCCGCAATGAAGGGGTCAGCACCCGCCACAA CCCCGAATTCACCATGCTCGAACTGTACGAGGCCTATGCCACCTACCACGAGATCATGGACCTGACCGAGAACCTGATCC GCGACGTGGCCCAGTCCGTGCTGGGCACCACCCAGGTGCGCTGGGAGGGCGCCGACATCGACCTGGGCCAGCCGTTCCGC CGCTGGCGCATGGACCAGGCCGTGCGCCATCACAATCCGGGCATCACCGTGGCCGACTGCACCGACCGCCAGGCGCTGGC GGGCCACTGCGAACGGCTGCAGATCAAGGTCAAACCGTCCTATGGCTGGGGCAGGCTGCTGCTGGAGATCTTCGAGGCCA CGGTCGAACACACCCTGGTCGAGCCGACCTTCATCACCGGCTACCCGCTGGAAGTCTCGCCGCTGGCCCGCGCCAGCGAT ACCGAGGCCGGCTACACCGACCGCTTCGAGCTGTTCATCAACGGCAAGGAGATCGCCAATGGCTTCTCCGAGCTCAACGA CCCGGAAGACCAGGCCGCGCGCTTCCGCGCCCAGGTCGAGGCCAAGGAAGGTGGCGACGACGAAGCCATGCACTTCGACG CCGATTACATCCGCGCCCTGGAGTACGGCATGTCACCGACCGGCGGCCTGGGGATCGGCATCGACCGGCTGGTGATGCTG CTGACCGGGGCCGATTCAATCCGGGATGTGCTGCTGTTCCCCTACATGCGCCCCGAAGCGCAGGGTTGA Protein sequence : MNEPPPIDENSLIAERRGKLHALRGQGIAYPNDFRRHALAGDLQAEFADADTFTAGVLEGLDRQVRLAGRLMAKRVMGKA SFAQIQDQSGRIQLFLQGNVLGERYEAFKGWDVGDIVGVEGTLTRTRTGELSVKATTLRLLTKSLRPLPDKWHGLSDVEQ RYRQRYVDLIVTPEAREVFIKRSRIIRAIRAWLDARGFLEVETPMMHYIPGGATARPFTTHHNALGLDLYLRVAPELYLK RLVVGGLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTENLIRDVAQSVLGTTQVRWEGADIDLGQPFR RWRMDQAVRHHNPGITVADCTDRQALAGHCERLQIKVKPSYGWGRLLLEIFEATVEHTLVEPTFITGYPLEVSPLARASD TEAGYTDRFELFINGKEIANGFSELNDPEDQAARFRAQVEAKEGGDDEAMHFDADYIRALEYGMSPTGGLGIGIDRLVML LTGADSIRDVLLFPYMRPEAQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-129 | 56 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004930590.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-129 | 56 |
