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Name : DSC_09070 (DSC_09070) Accession : YP_004930505.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 1784533 - 1785312 bp Length : 780 bp Strand : - Note : COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase DNA sequence : ATGCCTGAGCTGAACGAACCCTTCGTCGTCGCCATTCCCGCGCGGCACGATGCCTCGCGCCTGCCGGGCAAGCCGCTGCG CCTGCTGGGCGGCCGGCCGCTGGTGCTGCACGTGGCCGAGCGCGCCCTGGCCGCGGGCGCGCACCAGGTGTGGGTGGCCA CCGACGACGAACGCGTGGCGCGGGTACTGGACGGGCAGGGCGTGCAGGTGGCGATGACCGCGACCGGCCACGCCTCCGGC AGCGACCGTCTGGCCGAATGCGCGCGGATCGCCGGCTGGGGCGATGGCGCCCTGGTGGTGAACCTGCAGGGCGACGAGCC GTTCGCCCCACCCGAAGGCATCCGCGCGGTGGCCGCGGCACTGTCGTCCAGCGGCCATCCCATGGCCACGCTGGCCACCC CGATCGAGCAGGCCGCGCAGCTCTTCGACCCCAACACGGTCAAGCTGGTCACCGACGCGCGCGGCGATGCGCTGTATTTC AGCCGGGCGCCGCTGCCGTGGCATCGCGACGGGTTCGCCCGCAGCCGCCAGGTGTTGCCGGAATCGGCGGCGCCGTTCCT GCGCCACATCGGCATCTATGCCTACCGCGCCGGGTTCCTGCGCCAGTTTGCTGCATTGCCGCCGGGGCGGCTGGAGCGGA CCGAGTCGCTCGAACAACTGCGCGCGCTGGAAGCGGGCTTCAGGATTGCCGTGGCGCTGACCCCGGTCGCGTTTCCGCCC GGCGTGGATACACTCGAGGACCTGGAACGCGCCCAGCGCCATCTGGATGGTCTGGCGTGA Protein sequence : MPELNEPFVVAIPARHDASRLPGKPLRLLGGRPLVLHVAERALAAGAHQVWVATDDERVARVLDGQGVQVAMTATGHASG SDRLAECARIAGWGDGALVVNLQGDEPFAPPEGIRAVAAALSSSGHPMATLATPIEQAAQLFDPNTVKLVTDARGDALYF SRAPLPWHRDGFARSRQVLPESAAPFLRHIGIYAYRAGFLRQFAALPPGRLERTESLEQLRALEAGFRIAVALTPVAFPP GVDTLEDLERAQRHLDGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-30 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-30 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-30 | 42 |
