|
Name : DSC_08535 (DSC_08535) Accession : YP_004930398.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photo-lyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : - Position : 1667063 - 1668478 bp Length : 1416 bp Strand : + Note : COG0415 Deoxyribodipyrimidine photolyase DNA sequence : ATGCCCATCGCCCTGGTCTGGTTCCGCAGCGATCTGCGCCTGGCCGACAATCCGGCCCTGCATGCGGCGCTGGAAGCCGG CTTCGACCCGGTCCCGGTGTACATCCATGCCCCGCACGAGGAAGGCCGCTGGGCGCCGGGTGCGGCCTCCAATGCCTGGC GGCATCGCTCGCTCAAGGCGCTGGATCTGGCCTTGCGCCAGCGCGGCTCGCGCCTGCTGGTCCGCCGCGGCGACAGCGCG ATGGTCTTGCAGCAGCTGATCGAACAAAGCCGCGCGCAGGCGCTGTTCTGGAACCGCAAGTACGAACCGGCCACCCAGCC GCGCGATGCGGCGATCAAGCAGGCGCTCAAGCAGCGGCACGTCCAGGTGCGCAGCTGCAATGCCGCGTTGCTGGCCGAGC CGTGGGACGTGCAGACCAGGACCGGCGAGCCGTACAAGGTGTTCACTGCGTTCTATCGCAACGTCATGGCCGGGCTGGCG CAGCGTGCGCTGCAGGACGCGCCCGAAGCGCTGCCGGCCGTGCCGTCGGCGCTGAAGGGCGAGGGCATCGATGCGCTGGG CCTGGCACCTGCGTTGAACTGGGATGCAGGCTTCTGGGAGATCTGGCAAGCCGGCGAGGCCGGCGCCCACCAGGCGCTGG AGGTCTTCGTCGAGGGCGCATTGCGCGGCTACCTGGATCAGCGCGACCTGCCGGACCGGATCGGCACCTCGCGGCTGTCG CCGCACCTGCACTTCGGCGAGATCGCGCCGTGGCGGGTGATCGCACGGCTGCAGGCGCAACGCGGCGTCAGCCTGGACCG TGACATCGACGGTTTCATCCGGCAGCTGGTGTGGCGCGAGTTCGCCCATCACCTGCTGCATCATTTCCCGCACACGGCGC AGCAAAACCTCAACCCGCGCTTTGACCGGTTCGACTGGGCCAGCACCGCACCAGGCCCGCTGCAGGCCTGGCAGCACGGC AGGACCGGCGTGCCCATCGTCGATGCCGGCATGCGCGAGCTGTGGCAGACCGGGATGATGCACAACCGCGTACGCATGAT CGTGGCCAGCTACCTCACCAAGCACCTGCGCGTGCACTGGCTGGAAGGGGCGCGCTGGTTCTGGCAGACGCTGGTGGATG CGGACCTGGCCAACAACACGCTGGGCTGGCAGTGGGTCGCCGGCACCGGCGCCGATGCGGCGCCGTATTTCCGCGTGTTC AACCCGGTGACCCAGGCGCGCAAGTTCGATCCGCAGGCGCGCTACATCACCCGCTGGGTGCCCGAGCTGGAAGCACTGCC GGTGAATGCGCGCTTCGCGCCGTGGGAATTTCCGCAATTGTGCAGGGGCAGGGCCTGCGACTATCCGCACCAGCCGATCG TGGACCTGGCCCAAGGCCGCCAGGCCGCGCTGGCCGCCTATGCCAGGACCCGCTGA Protein sequence : MPIALVWFRSDLRLADNPALHAALEAGFDPVPVYIHAPHEEGRWAPGAASNAWRHRSLKALDLALRQRGSRLLVRRGDSA MVLQQLIEQSRAQALFWNRKYEPATQPRDAAIKQALKQRHVQVRSCNAALLAEPWDVQTRTGEPYKVFTAFYRNVMAGLA QRALQDAPEALPAVPSALKGEGIDALGLAPALNWDAGFWEIWQAGEAGAHQALEVFVEGALRGYLDQRDLPDRIGTSRLS PHLHFGEIAPWRVIARLQAQRGVSLDRDIDGFIRQLVWREFAHHLLHHFPHTAQQNLNPRFDRFDWASTAPGPLQAWQHG RTGVPIVDAGMRELWQTGMMHNRVRMIVASYLTKHLRVHWLEGARWFWQTLVDADLANNTLGWQWVAGTGADAAPYFRVF NPVTQARKFDPQARYITRWVPELEALPVNARFAPWEFPQLCRGRACDYPHQPIVDLAQGRQAALAAYARTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 2e-73 | 46 |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 1e-73 | 45 |
