|
Name : DSC_08530 (DSC_08530) Accession : YP_004930397.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1665644 - 1666981 bp Length : 1338 bp Strand : + Note : COG0305 Replicative DNA helicase DNA sequence : ATGCCGCCGCACTCCATCGAAGCCGAACAGGCGGTGCTCGGTGGCCTGATGCTGGTTGCCGATGCCTATGACCGGGTCAA CGACAGGCTCACTTCCGAGGACTTCTATCGCCGCGACCACCAGCTGATCTACCGCGCCATCAGCGAGCTGGCCGAGCGCA GCCGGCCCTACGATGCGGTGACCCTGGGCGAGTGGTTCGACGCGCAGGGCCAGTCGGACCTGATCGCCGGCGGTGCCTAC CTGATCGAACTGGCCAGCTCCACGCCGTCGGCGGCCAACATCACCGCCTATGCCGAGATCGTGCGCGACAAGGCGGTGAT GCGCCAGCTGATCGATGTGGGCACCGAGATCGTCAACAACGGCTTCCAGCCCGAAGGCCGCGAGAGCACCGAGCTGCTGG CCGTGGCCGAGCAGAAGGTGTTTGCCATCGCCGAGGCCGGCTCGCGCGGACGCAGCGACTTTGTGTCCATGCCCAGCGCG CTCAAGGATGCCTTCTCGGTGCTGCAGGACCGCTTCAACAGCGGCGGCAACGTCACCGGCCTGGCCACCGGCTATACCGA GTTCGATTACCTCACCGCCGGGCTGCAGCCGACCGACCTGCTGATCCTGGCGGCGCGTCCGGCGATGGGCAAGACCACCC TGGCGCTGAACATCGCCGAATACGTGGCGATCAAGTCGAAGAAGGCCGTGGCGGTGTTCTCGATGGAAATGTCGGCCGCC CAGCTGGCCCTGCGCCTGATCTCCTCCAATGGCCGCATCAACGCCCAGCGCCTGCGCACCGGCCAGCTCGAGGACGAGGA CTGGAGCCGGGTCACCGCCGCGATCCGGATGCTGAAGGAAACCAAGATCTTCATCGACGACACCCCTGGCCTGTCGCCGG AGGTGCTGCGCTCCAAGTGCCGGCGCCTCAAGCGCGAACACGACCTGGGCCTGGTGGTGATCGACTACCTGCAGCTGATG TCGGTGCCGGGCAACAGCGAAAACCGGGCCACGGAGATCTCCGAGATCAGCCGCTCGCTCAAGGGCCTGGCCAAGGAGCT GAACGTGCCGGTGATCGCCCTGTCCCAGCTCAACCGCTCGCTGGAAACGCGCACCGACAAGCGCCCGGTGATGGCCGACC TGCGCGAATCGGGCGCCATCGAGCAGGACGCCGACGTGATCGTCTTCATCTACCGCGACGACTACTACAACAAGGAGAAT TCGCCGGACAAGGGCCTGGCCGAGGTCATCATCGGCAAGCAGCGCAGCGGCCCGACCGGCTCGCTCAAGCTCAAGTTCTT CGGCGAGTACACCCGCTTTGACAACCTGGCCCACGACGCAGTGGGCAGCTTCGAATAG Protein sequence : MPPHSIEAEQAVLGGLMLVADAYDRVNDRLTSEDFYRRDHQLIYRAISELAERSRPYDAVTLGEWFDAQGQSDLIAGGAY LIELASSTPSAANITAYAEIVRDKAVMRQLIDVGTEIVNNGFQPEGRESTELLAVAEQKVFAIAEAGSRGRSDFVSMPSA LKDAFSVLQDRFNSGGNVTGLATGYTEFDYLTAGLQPTDLLILAARPAMGKTTLALNIAEYVAIKSKKAVAVFSMEMSAA QLALRLISSNGRINAQRLRTGQLEDEDWSRVTAAIRMLKETKIFIDDTPGLSPEVLRSKCRRLKREHDLGLVVIDYLQLM SVPGNSENRATEISEISRSLKGLAKELNVPVIALSQLNRSLETRTDKRPVMADLRESGAIEQDADVIVFIYRDDYYNKEN SPDKGLAEVIIGKQRSGPTGSLKLKFFGEYTRFDNLAHDAVGSFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 4e-95 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-84 | 46 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-88 | 46 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-87 | 46 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 8e-88 | 46 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-78 | 45 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-77 | 45 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-77 | 45 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 7e-63 | 41 |
