|
Name : DSC_08120 (DSC_08120) Accession : YP_004930316.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1574938 - 1576218 bp Length : 1281 bp Strand : + Note : COG0172 Seryl-tRNA synthetase DNA sequence : ATGCTTGATCCCGCCCTGCTCCGCAACCAGCCTGCCGACCTTGCCCAGCGCCTGCGCCAAACGCGCGGCTTTGAGTTGGA CGTGTCCGCGCTGGAATCCCTGGAGGCACGCCGCAAGCAGCTGCAGGTGCGTACCCAGGAACTGCAGCACCTGCGCAATG CCCATTCCAAGGCGATCGGCCAGGCCAAGGCCCGCGGCGAGGATGCCGCGCCCCTGCTGGCCGAGGTCGCCGGCTTCGGC GAGGAGCTCAAGGCCTCGGAAATCGAGCTGGACCAGCTGCGCGCGCAGATCGAGGCCATCGCCATGGGCATCCCCAACCT GCCGCACGCCAGCGTGCCGCCGGGCCTGGATGAAACCGGCAACGTCGAGCAGCACCGCTGGGGCACGCCGCGCCGCTTCG ATTTCCCGGTCAAGGACCATGTCGAACTGGGCGCGCGCAACGGCTGGCTCGATGGCGATACCGCGGCCAAGCTGTCAGGG GCGCGCTTCACCGTGTTGCGCGGGCCGATCGCGCGCCTGCACCGGGCCCTGGCGCAGCTGATGCTGGACCTGCATACCGG CGCGCATGGCTACCAGGAAGTCAACGTCCCGGTGATCGTCAACGCCGAGTCGATGCGCGGTACCGGCCAGCTGCCCAAGT TCGAGGAGGACCTGTTCCGCACCGAGGTGGGCCAGGCCACGCGCTACCTGATCCCGACCTCGGAAGTGCCGCTGACCAAC ATCGTCCGCGACAGCATCGTCGAGGACAGCGCGCTGCCGCTGCGCATGACTGCGCACTCGATGTGCTTCCGCGCCGAGGC CGGCAGCCACGGCCGCGACACTCGCGGCATGATCCGCCAGCACCAGTTCGAAAAGGTCGAGCTGGTCGCCATCACCCGCC CGCAGGACAGCGACGACGAGCACGAGCGCATGACCCGCTGTGCCGAAGTGGTACTGGAAACCTTGGGCCTGCCCTACCGC CGCATGCTGCTGTGCGCCGGCGACATGGGCTTCTCGGCGGCCAAGACCTACGACCTGGAGGTCTGGCTGCCCTCGCAGGA CAGCTACCGCGAGATTTCCTCGATCTCCAACTGCGAGGCGTTCCAGGCCCGGCGCATGCAGGCACGCTGGCGCAATCCGG CCACCGGCAAGCCCGAGAGCGTGCACACGCTCAACGGTTCGGGCGTGGCCGTGGGCCGCTGCCTGATCGCGGTGATGGAG AACTGCCAGCAGGCTGACGGCAGCATCCAGGTACCCGAGGCGCTGCGCCCGTACATGGGCGGCATCGCGCGCATCGCCTG A Protein sequence : MLDPALLRNQPADLAQRLRQTRGFELDVSALESLEARRKQLQVRTQELQHLRNAHSKAIGQAKARGEDAAPLLAEVAGFG EELKASEIELDQLRAQIEAIAMGIPNLPHASVPPGLDETGNVEQHRWGTPRRFDFPVKDHVELGARNGWLDGDTAAKLSG ARFTVLRGPIARLHRALAQLMLDLHTGAHGYQEVNVPVIVNAESMRGTGQLPKFEEDLFRTEVGQATRYLIPTSEVPLTN IVRDSIVEDSALPLRMTAHSMCFRAEAGSHGRDTRGMIRQHQFEKVELVAITRPQDSDDEHERMTRCAEVVLETLGLPYR RMLLCAGDMGFSAAKTYDLEVWLPSQDSYREISSISNCEAFQARRMQARWRNPATGKPESVHTLNGSGVAVGRCLIAVME NCQQADGSIQVPEALRPYMGGIARIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-92 | 51 |
