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Name : DSC_06815 (DSC_06815) Accession : YP_004930055.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1267364 - 1268644 bp Length : 1281 bp Strand : - Note : COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase DNA sequence : ATGCCGCAGACCAACGCCAGTCCCAGGATCGCCATCATCGGGCTTGGCTATGTGGGGCTGCCGCTGGCCGTGGCCTTCGG CCGGCAATATGAAACGGTCGGCTTCGACATCAGCGCTGCACGCGTGCGCGCCTTGCAGGCCCGCCAGGACCACACGCTGG AAATCTCACCCGAGCAATGGAAGGCGGCTGGACGCCTCACCTGCACCGACGATGCCGCCCACCTGGCCGGCTGCGAGGTG TTCATCGTCGCCGTGCCCACGCCGGTGGACGACTACAAGCGCCCGGACCTGGGGGCGCTGGAAGCAGCCAGCCGCACCGT CGGCCGCGCCATCGGCCCCGGCGGCCTGGCGATCTTCGAATCCACGGTCTATCCCGGTGCCACCGAAGAGATCTGCGTGC CGATCATCCAGGCCGAATCCGGGCTGGTGTTCAACCGCGATTTCCACGCCGGCTACAGCCCCGAACGCATCAACCCCGGC GATCGCGAACACCGCCTGGAAACCATCGTCAAGGTGACCTCCGGCTCCACGCCCGAAGCGGCCGCGCGCGTGGATGCGCT GTACCGCAGCATCGTCCAGGCAGGCACCCACCGCGCGCCCAGCATCCGGGTGGCCGAAGCGGCCAAGGTCATCGAGAACA CCCAGCGCGACGTCAACATCGCCCTGGTCAACGAACTGGCCCTGCTGTTCCACCGCCTCGGCATCGACACCGGCGAGGTC CTCGAGGCGGCCGGCACCAAGTGGAACTTCCTGCGCTTCAAGCCGGGCCTGGTCGGCGGCCACTGCATCGGCGTGGATCC GTATTACCTGACCCACAAGGCGCAACATGTGGGCCACCATCCGGAAGTGATCCTGGCCGGGCGCCGCATCAACGATGGCA TGGGCGCGCACGTGGCCCAGCGCACCATCAAGCTGATGGCCAGGCGCGGGCAGCCGATTTCCGGGGCGCGGGCACTGGTG CTGGGCCTGGCCTTCAAGCAGGACTGTCCGGACCTGCGCAACACCAGGGTGATCGACATCGTCCAGGAATTGCAGCAGTA CAACGTGTCGGTGGACGTGCACGACCCCTGGGTCGACGCGGACCAGGCCAGGCACGAATATGGCCTGGACCTGGTCCAAA CGCCCGCACCCGGCCACTACGACGCGGTGATCCTGGCCGTGGCCCATCGCCAGTTCATCGCGCTCGGTGGCGCCGGGGTG CGCGCCTTCGCCAAACCCTGCGGCACCTTGTTCGACGTGCAGCGCGTGCTGTCGCGCGAAGACGTCGACGACCGCCTCTG A Protein sequence : MPQTNASPRIAIIGLGYVGLPLAVAFGRQYETVGFDISAARVRALQARQDHTLEISPEQWKAAGRLTCTDDAAHLAGCEV FIVAVPTPVDDYKRPDLGALEAASRTVGRAIGPGGLAIFESTVYPGATEEICVPIIQAESGLVFNRDFHAGYSPERINPG DREHRLETIVKVTSGSTPEAAARVDALYRSIVQAGTHRAPSIRVAEAAKVIENTQRDVNIALVNELALLFHRLGIDTGEV LEAAGTKWNFLRFKPGLVGGHCIGVDPYYLTHKAQHVGHHPEVILAGRRINDGMGAHVAQRTIKLMARRGQPISGARALV LGLAFKQDCPDLRNTRVIDIVQELQQYNVSVDVHDPWVDADQARHEYGLDLVQTPAPGHYDAVILAVAHRQFIALGGAGV RAFAKPCGTLFDVQRVLSREDVDDRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-117 | 56 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-117 | 56 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-110 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DSC_06815 | YP_004930055.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 6e-118 | 56 |
