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Name : DSC_01490 (DSC_01490) Accession : YP_004928992.1 Strain : Pseudoxanthomonas spadix BD-a59 Genome accession: NC_016147 Putative virulence/resistance : Virulence Product : putative type II/IV secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 109691 - 111496 bp Length : 1806 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGGAGCAGCAGCGCAAGGCCGATTTTTCTCCCGATTCCACGGTGCTGGGCTCAGGCCGGCTGGACTTTGCCCAGGTCAC CCGCGCGCTGCTGGCCGACGGCCTGGTGGCCGAGGCCGACACCGGCCGCATCCAGATGTCGGCCGCCGGCGCGCGCAGCG CCAGCGAGGTCCATCCGCTGGTGCTGCTGGCCAACCTGAAGCTGGCCGATGCCCGTGGCGGTGAACTGAGCCTGGAACGG CTGACCGAGTGGCTGGCCCTGCGCATCGGCGTGCGCTACCTGCGCGTGGATCCGACCCGGGTGGACGTGGCCAGCGTCAC CGCGGTGGTCAGCCAGGCCTACGCGCGCCGGCACCGGATCCTGCCGATCGCGGTCGAGCCGGACCGGGTCCTGATCGCCA CCAGCGAGCCGCTGGACACCACCTGGAAGCCGGACCTGACCCACCTGACCCGGCGCAACATCGAGCTGGTCCTGATCAAT CCGCTGGACCTGCATCGCTACACGATGGAGTTTTTCGGCGTGACCCGCTCGGTGCGCGGGGCCAGGGACATGCGCGAGCG CGAGCAGGGTTCGGTCATGCCCAGCTTCGAACAGCTGGTCGACCTGGGGCAAAGCGGCGAAGTCGGCGCCGACGATCACC ACGTGGTCCAGATCGTGGACTGGATGCTGCAGTACGCCTACGAGCAGCGCGCCTCGGACATCCACCTGGAGCCGCGGCGC GAACTGGGCCGGATCCGCTTCCGCATCGACGGGGTGCTGCACAAGGTGTTCGAACTGCCGCCGCCGGTGATGACCGCGGT GGTCTCGCGGATCAAGGTGCTGGGCCGGATGGACCTGGCCGAGCGCCGGCGCCCGCAGGACGGCCGGATCAAGACCCGTT CGCCGGGCGGGCGCGAGGTGGAGATGCGCCTGTCGACCATGCCCACCGCCTTCGGCGAGAAGTGCGTGATGCGCATTTTC GACCCGGACACCGCGTTCAAGCCGATCGCCGAACTGGGCTTCAGCCCGACCGAGGCGGCCGGCTGGAATGCGCTGGTGGA GCAGCCGCACGGGATCGTGCTGGTGACCGGGCCGACCGGCTCGGGCAAGACCACCACGCTGTATTCGACCCTGCGCAAGC TGGCCACGGCCGACGTGAACGTGTGCAGCGTCGAAGACCCGATCGAAATGATCTCGCCCGAGTTCAACCAGATGCAGGTG CAGACCAACATCGACCTGGATTTCGCCTCTGGCGTGCGCACCCTGCTGCGCCAGGACCCGGACATCATCATGATCGGCGA GATCCGCGACCTGGAGACCGCGCAGATGGCGGTCCAGGCTTCGCTGACCGGCCACCTGGTGCTGTCCACGCTGCACACCA ACGACGCGCCCTCGGCCATCACCCGCCTGCTCGACCTGGGCGTGGCCCATTACCTGGTCGCCTCGACCCTGACCGGGGTG CTGGCCCAGCGCCTGGTGCGCACCCTGTGCCCGCACTGCAAGGTGCCCGCCGCGGTGCCGGCGCATGCCTGGGAGATCCT GCTGGAGACCGGCCGCAGCGTGCCCGAGGATGCCCACCCGCACCGCGCGGTTGGCTGCCTGGAATGTCGCCGCACCGGCT ACATGGGCCGGGTCGGCCTGTACGAGCTGATGCCGCTGACCCCGCAGCTGCGCAGCATGATCCGCGCCGACATGGACCTG GCCGCCTTCACCCGCGCCGCGCGCATCCAGGGCATGCGTACCCTGCGCGATGCCGGCCTTGACATGGTGGCGCGCGGTCT GACGACCATCGAGGAAGTGGTCTCGGTCCTGCCGCCACGGGAATGA Protein sequence : MEQQRKADFSPDSTVLGSGRLDFAQVTRALLADGLVAEADTGRIQMSAAGARSASEVHPLVLLANLKLADARGGELSLER LTEWLALRIGVRYLRVDPTRVDVASVTAVVSQAYARRHRILPIAVEPDRVLIATSEPLDTTWKPDLTHLTRRNIELVLIN PLDLHRYTMEFFGVTRSVRGARDMREREQGSVMPSFEQLVDLGQSGEVGADDHHVVQIVDWMLQYAYEQRASDIHLEPRR ELGRIRFRIDGVLHKVFELPPPVMTAVVSRIKVLGRMDLAERRRPQDGRIKTRSPGGREVEMRLSTMPTAFGEKCVMRIF DPDTAFKPIAELGFSPTEAAGWNALVEQPHGIVLVTGPTGSGKTTTLYSTLRKLATADVNVCSVEDPIEMISPEFNQMQV QTNIDLDFASGVRTLLRQDPDIIMIGEIRDLETAQMAVQASLTGHLVLSTLHTNDAPSAITRLLDLGVAHYLVASTLTGV LAQRLVRTLCPHCKVPAAVPAHAWEILLETGRSVPEDAHPHRAVGCLECRRTGYMGRVGLYELMPLTPQLRSMIRADMDL AAFTRAARIQGMRTLRDAGLDMVARGLTTIEEVVSVLPPRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-72 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-72 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DSC_01490 | YP_004928992.1 | putative type II/IV secretion system protein | VFG2048 | Protein | 4e-74 | 44 |
