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Name : clpB (MADAR_047) Accession : YP_004928197.1 Strain : Blattabacterium sp. MADAR Genome accession: NC_016146 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 55211 - 57304 bp Length : 2094 bp Strand : + Note : annotation based on TIGRFAM chaperone_ClpB protein motif and similarity to AA sequences in nr DNA sequence : ATGAAACAGAGAATTTTTTTTTCTTCTACTTATTCAGATGAAGATATTGAAAACGATGGGACTACTGCTTCTTACGGAGG TGGATCTGGAGGTGGGACTGGCGGAAGTACGGGTTCTAGTTATTATGGAGGGACTTCTATAAGAAGTAAAACTCCTGTAT TGGACAATTTTGGAATAGATTTAAATTCTATAGCCATTGAAGGGAAATTAGATCCAGTAGTAGGAAGAGATAAAGAAGTT GAACGAGTATCTCAAATATTGAGTAGAAGAAAAAAGAATAATCCTCTTCTAATAGGAGAACCAGGAGTAGGGAAATCTGC TATTGCTGAGGGTTTTGTCTTACGTATTGTACAAAAAAAGGTTTCCAGAGTTTTATATAATAAAAGAGTGGTTGTTTTAG ATTTGGCTAGCTTAGTCGCTGGAACTAAATATAGAGGTCAGTTTGAAGAAAGAATGAAAGCTATCATAAACGAATCAGAA AAAAATAAAGATTTAATTCTTTTCATAGATGAAATCCATACTATGATTGGTGCAGGAGGTACTACAGGGTCCTTGGATGC TTCTAATATATTCAAACCTGCTTTAGCAAGAGGATATATTCAATGTATTGGAGCAACTACCTTAAATGAATATAGACAAT ATATAGAAAAGGATGGGGCTTTGGAACGTAGATTTCAAAAAATTATAGTACAGCCTTCTTCTGAAAAAGAAACTATGGAA ATTTTAAAAAAAATAAAAGGAAGGTATGAAAGTCATCATAATGTTATTTATACAGAAGCTACTATAAAATCTTGTGTAAA TCTAACCGTACGATATATTGTTGATCGTTTTTTACCAGATAAAGCCATTGATGCACTAGATGAGGCTGGATCTCGTGTAC ATATTAAGAATATTAAAGTGCCACAAGAAGTGGTTGTTTTAGAAAAAAAATTGGATAATATTCGAAAAGAAAAATCTAAA GTAGTTAAGAATCAAAAATATGAAGAAGCGGCACGTCTTCGTGATACGGAAAAAAAAATAGAAAAACAATTGATAAAAGC GCAAGTAGAATGGGAAGAAACCTCCAAAGAAAATAAAGAAATTGTTTCTGAAGAAGACGTAGAAGAAGTAGTATCTATGA TGAGTGGAGTTCCGGTAAATAGAATCGCCCAAGCGGAAATGAACAGGTTGAATAAAATGATTGATACATTAAAGGAAAAA ATAATAGGACAAGATGAAGCTGTAGAAAAAATAGTAAAAGCGGTTCAGAGGAATAGAACTGGATTAAAAGATCCTAATAG TCCTATAGGATCTTTTATTTTTTTAGGAAAGACAGGAGTTGGAAAAACTTATTTAGCAAAAGTTTTTGCGAGGGAACTAT TTGATTCAGAAGAATCCTTAGTACGTATTGATATGAGTGAATATATGGAAAAATTTTCTGTTTCTAGATTAATAGGAGCT CCTCCTGGTTATGTTGGGTATGAAGAAGGAGGACAACTAACAGAAATAATACGTCGTAAGCCTTATTCGGTTATTTTATT GGATGAAATAGAAAAAGCACATCATGAAGTATTCAATATACTATTGCAGATTCTTGATTATGGATGCGTTACAGATAGTG TTGGAAGAAAAATTAACTTTAAAAATACTGTCATCATTTGTACTTCAAATACAGATACACAAAAATTAAAAAGAATTGGT CAAGAAATCGGTTTTTATACTCAAACAAGAAAATCGATGGATTCTAACTTAGAACAGACTTTGAAAAAGAGTTTTTCTCC AGAATTTATAAATAGAATAGATGATATCATCATTTTTAATTCTCTAAAAATAGAAGATATATCTAAAATAACCCATATAG AATTAGAAAAAGTAAAAAATCAGATGTTGGATTTAGGATATAAGTTAACTTTTCTTTCCGAAGTAAAAGATTTCATTAAT AAAAAAGGATTTAATAAAGAATATGGAGCTCGTCCATTAAAGAGAGTAATAGAAAAATTTATAAAGAATCCCATATCGGA ATGGATTATTAATGGATCTTTGAAAAGAGGAGATGAAATAATATTGAAAATAAACGATAATAAAGATGATATTAAAGTTT ATAAAAAATCATAA Protein sequence : MKQRIFFSSTYSDEDIENDGTTASYGGGSGGGTGGSTGSSYYGGTSIRSKTPVLDNFGIDLNSIAIEGKLDPVVGRDKEV ERVSQILSRRKKNNPLLIGEPGVGKSAIAEGFVLRIVQKKVSRVLYNKRVVVLDLASLVAGTKYRGQFEERMKAIINESE KNKDLILFIDEIHTMIGAGGTTGSLDASNIFKPALARGYIQCIGATTLNEYRQYIEKDGALERRFQKIIVQPSSEKETME ILKKIKGRYESHHNVIYTEATIKSCVNLTVRYIVDRFLPDKAIDALDEAGSRVHIKNIKVPQEVVVLEKKLDNIRKEKSK VVKNQKYEEAARLRDTEKKIEKQLIKAQVEWEETSKENKEIVSEEDVEEVVSMMSGVPVNRIAQAEMNRLNKMIDTLKEK IIGQDEAVEKIVKAVQRNRTGLKDPNSPIGSFIFLGKTGVGKTYLAKVFARELFDSEESLVRIDMSEYMEKFSVSRLIGA PPGYVGYEEGGQLTEIIRRKPYSVILLDEIEKAHHEVFNILLQILDYGCVTDSVGRKINFKNTVIICTSNTDTQKLKRIG QEIGFYTQTRKSMDSNLEQTLKKSFSPEFINRIDDIIIFNSLKIEDISKITHIELEKVKNQMLDLGYKLTFLSEVKDFIN KKGFNKEYGARPLKRVIEKFIKNPISEWIINGSLKRGDEIILKINDNKDDIKVYKKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-138 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004928197.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 4e-154 | 53 |
| clpB | YP_004928197.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 2e-128 | 47 |
