Gene Information

Name : ureC (MADAR_225)
Accession : YP_004928365.1
Strain : Blattabacterium sp. MADAR
Genome accession: NC_016146
Putative virulence/resistance : Virulence
Product : urease, alpha subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : -
Position : 237817 - 239523 bp
Length : 1707 bp
Strand : +
Note : annotation based on TIGRFAM urease_alph protein motif and similarity to AA sequences in nr

DNA sequence :
ATGAAAAAAATAGATAGAGAATCTTATGCAAGGATGTATGGTCCAACAAAAGGAGATAAAATTCGTTTGGGAGATACTTC
TTTATGGATTGAAATAGAAAAAGATTATACAATTTATGGAGATGAATGTGTTTTCGGAGGTGGAAAAGTAATTCGAGACG
GAATGGGACAACATCCATTTGCAACAAGAGACGAAGGAATCCTGGACTTAGTCCTAACTAATGCTATTATTATTGATCAT
TGGGGAATCGTGAAAGCAGATATTGGAATAAAAAATGGAGTCATTGTTGGAATTGGGAAATCCGGAAATCCATATTTTAT
GGATGGAGTAACGAAGAATATGTATATTGGAGCGGGAACCGAAGTTATTTCTTCTGAAAATATGATTGTTACAGCTGGGA
GTGTGGACAGTCATGTTCATTTTATATGTCCTCAATTATTGGAAGTAGCTTTAGAAAACGGAACTACCACTATTGTAGGT
GGAGGATCAGGTCCTACTACTGGTACCATAGCTACTAATTGTACTTCAGGAGTATGGAATATTCAACGAATGTTAAAAAG
TACAGATCACATTCCTATAAATTTTCTTTTTCTTGCCAGTGGCAATAGTTCTCATCCTCAGGCCTTAATCGAACAAATAA
AGGCTGGTGCTGGTGGTTTAAAAATTCATGAGGATTGGGGAAGTACTCCATATGTTATAGATCAATGTTTAGAAGTATCG
GAAAATCTAGATGTACAAGTGAATATTCATACAGACTCCTTGAACGAATCAGGTTATGTGGAGGACACCTTAAAAATATT
TAAGGATAGGACTATTCATACTTATCATACGGAAGGAGCAGGAGGTGGACATTCTCCTGATTTACTGAAAGTAATATCTT
ATTCCAATGTGCTTCCATCATCTACAAGTCCCACTATGCCTTATACTTGTAACACTATTGATGAACATTTAGATATGTTA
ATGATATGTCATCATTTGGATTCAAATATTCCAGAAGACATCGCATTTGCTAAATCACGAATACGATCTGAAACTATTAG
TGCTGAAGGAGTATTACACGATATAGGAGCTATTAGTATGATGAGTTCTGATTCTCAAGCTATGGGAAGAATTGGGGAGA
TCATAAAACGAACTTGGCAGACAGCCGATAAAATGAAAAAACAACGAGGCTCTCTAAACAATGATTCCTATAGAAATGAT
AATTTTAGAGTAAAAAGATATATATCTAAATATACTATAAATCCTTCTATCACTCATGGGATTTCAGAATATGTAGGATC
CATTCATATTGGAAAAATGGCCGATTTGGTGTTATGGAAACCCTCTTTTTTTGGAGTAAAACCAGAATTAGTTATAAAAA
GTGGAATGATTGTATACGCTAGTATTGGAGATCCTAATGCTACTATACCTACTCCTCAACCGTTTATGTATCGTAAGATG
TTTGGTTATTTTGAACAAAAATTGAGTAGTATTTTTATTTCTATACATGCAATAAATGATGGATTTATAGAAAAAAATGA
AATAGAAAAGGAAATTAAGATAGTAAAAGGATGTCGTTCTTTATCCAAAGGAGATATGATATTAAATGAAGAAACTCCAA
ATATAAATATAGATCCAAAAACTTATGGAGTTTATATCAATGGAGAAAGAATACAATCAAAGCCATCGGATATTTTACCG
CTTTCTCAAAGATATTTTTTATTCTAA

Protein sequence :
MKKIDRESYARMYGPTKGDKIRLGDTSLWIEIEKDYTIYGDECVFGGGKVIRDGMGQHPFATRDEGILDLVLTNAIIIDH
WGIVKADIGIKNGVIVGIGKSGNPYFMDGVTKNMYIGAGTEVISSENMIVTAGSVDSHVHFICPQLLEVALENGTTTIVG
GGSGPTTGTIATNCTSGVWNIQRMLKSTDHIPINFLFLASGNSSHPQALIEQIKAGAGGLKIHEDWGSTPYVIDQCLEVS
ENLDVQVNIHTDSLNESGYVEDTLKIFKDRTIHTYHTEGAGGGHSPDLLKVISYSNVLPSSTSPTMPYTCNTIDEHLDML
MICHHLDSNIPEDIAFAKSRIRSETISAEGVLHDIGAISMMSSDSQAMGRIGEIIKRTWQTADKMKKQRGSLNNDSYRND
NFRVKRYISKYTINPSITHGISEYVGSIHIGKMADLVLWKPSFFGVKPELVIKSGMIVYASIGDPNATIPTPQPFMYRKM
FGYFEQKLSSIFISIHAINDGFIEKNEIEKEIKIVKGCRSLSKGDMILNEETPNINIDPKTYGVYINGERIQSKPSDILP
LSQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 3e-156 60
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 3e-156 60
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-140 54
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 4e-140 54
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-140 54
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-140 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_004928365.1 urease, alpha subunit VFG0270 Protein 1e-147 55