Gene Information

Name : Sfla_0976 (Sfla_0976)
Accession : YP_004921949.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1122526 - 1123329 bp
Length : 804 bp
Strand : -
Note : KEGG: cai:Caci_0692 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGCACACATCACACGACCTCCGTCGGACGGAGGCGGTACGACTGGACACCGTGTCGAAGATCTATGGACGGGCGGACAG
CCAGGTGGCCGCGCTCCGGGAACTCTCCATGAGCTTCGCCGACGCCACCTTCACCGCGGTGATGGGACCGTCCGGTTCCG
GCAAGAGCACCTTCCTGCACTGCGCCGCGGGACTGGTCAGGCCCACGTCCGGAAGCGTGACCGTCGGTGGCACCGACCTC
GCCGGCCTGGACGACACCCAGCTGACCATGCTCCGCCGCGACCGGATCGGCTTCATCTTCCAGTCGTTCAACCTGCTGCC
CGCCCTGACGGTGATGCAGAACATCACCCTGCCGCTGCAACTCGCCGGAAAGCGTCCCGACAAGAACCTCATCCGCTCCG
TCGTCCAGCGCGTGGGCCTCGCCGACCGCCTCGGCCACCTCCCGTCCGAACTGTCCGGAGGTCAGCAGCAGCGCGTCGCC
ATCGCGCGCGCCCTGGTCACCCAGCCCGCCGTCGTCTTCGCCGACGAGCCCACCGGAGCGCTGGACACCCGAACCGCGTC
GGCCGTGCTCTCCCTGCTGCGCGAGTCCGTCGACAACGCCCGCCAGACCCTGGTCATGGTCACCCACGACCCGGTGGCCG
CCTCGTACGCCGACCGGGTCGTCTTCCTCGCGGACGGCGCCCTCGCCGGTGAGCTGCACCGGCCGACGGCCGACGCGGTC
GCGGCGCGGATGACACGACTCGGCGCCTGGGAGGACGAGAACCGCCAGCAGGCCGCACCGATGACGTCCGGAGGGCTGTA
CTGA

Protein sequence :
MHTSHDLRRTEAVRLDTVSKIYGRADSQVAALRELSMSFADATFTAVMGPSGSGKSTFLHCAAGLVRPTSGSVTVGGTDL
AGLDDTQLTMLRRDRIGFIFQSFNLLPALTVMQNITLPLQLAGKRPDKNLIRSVVQRVGLADRLGHLPSELSGGQQQRVA
IARALVTQPAVVFADEPTGALDTRTASAVLSLLRESVDNARQTLVMVTHDPVAASYADRVVFLADGALAGELHRPTADAV
AARMTRLGAWEDENRQQAAPMTSGGLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-46 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-46 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-46 47
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-42 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_0976 YP_004921949.1 ABC transporter CP001581.1.gene598.p Protein 4e-47 48
Sfla_0976 YP_004921949.1 ABC transporter CP001581.1.gene798.p Protein 3e-45 47
Sfla_0976 YP_004921949.1 ABC transporter NC_008702.1.4606598. Protein 4e-39 45
Sfla_0976 YP_004921949.1 ABC transporter NC_012469.1.7686878. Protein 2e-45 43